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Panzer_STK_ModelEvaluatorFactory.hpp
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1// @HEADER
2// *****************************************************************************
3// Panzer: A partial differential equation assembly
4// engine for strongly coupled complex multiphysics systems
5//
6// Copyright 2011 NTESS and the Panzer contributors.
7// SPDX-License-Identifier: BSD-3-Clause
8// *****************************************************************************
9// @HEADER
10
11#ifndef PANZER_STK_MODEL_EVALUATOR_FACTORY_HPP
12#define PANZER_STK_MODEL_EVALUATOR_FACTORY_HPP
13
14#include <iostream>
15#include <string>
16#include <map>
17
18#include "Teuchos_RCP.hpp"
19#include "Teuchos_Ptr.hpp"
20#include "Teuchos_Comm.hpp"
21#include "Teuchos_DefaultMpiComm.hpp"
22#include "Teuchos_ParameterList.hpp"
23#include "Teuchos_ParameterListAcceptorDefaultBase.hpp"
24
25#include "PanzerAdaptersSTK_config.hpp"
35
36#include "Panzer_NodeType.hpp"
37
38#ifdef PANZER_HAVE_EPETRA_STACK
40#include "Thyra_EpetraModelEvaluator.hpp"
41#endif
42
43#ifdef PANZER_HAVE_TEKO
44#include "Teko_RequestHandler.hpp"
45#endif
46
47namespace Piro {
48#ifdef PANZER_HAVE_TEMPUS
49 template <typename ScalarT> class TempusSolverForwardOnly;
50#endif
51}
52
53namespace Thyra {
54 template<typename ScalarT> class ModelEvaluator;
55 template<typename ScalarT> class LinearOpWithSolveFactoryBase;
56}
57
58namespace panzer {
59 struct GlobalData;
60 class GlobalIndexer;
61 template <typename> class LinearObjFactory;
62
63 class BlockedDOFManager;
64 class DOFManager;
65 class ConnManager;
66}
67
68namespace panzer_stk {
69
70 class STKConnManager;
71 class NOXObserverFactory;
72#ifdef PANZER_HAVE_TEMPUS
73 class TempusObserverFactory;
74#endif
75 class WorksetFactory;
76
77 template<typename ScalarT>
78 class ModelEvaluatorFactory : public Teuchos::ParameterListAcceptorDefaultBase {
79
80 public:
81
84 void setParameterList(Teuchos::RCP<Teuchos::ParameterList> const& paramList);
85 Teuchos::RCP<const Teuchos::ParameterList> getValidParameters() const;
87
95 void setStratimikosList(const Teuchos::RCP<Teuchos::ParameterList>& paramList);
96
104 void buildObjects(const Teuchos::RCP<const Teuchos::Comm<int> >& comm,
105 const Teuchos::RCP<panzer::GlobalData>& global_data,
106 const Teuchos::RCP<const panzer::EquationSetFactory>& eqset_factory,
107 const panzer::BCStrategyFactory & bc_factory,
109 bool meConstructionOn=true);
110
111 Teuchos::RCP<Thyra::ModelEvaluator<ScalarT> > getPhysicsModelEvaluator();
112
115
116 void setNOXObserverFactory(const Teuchos::RCP<const panzer_stk::NOXObserverFactory>& nox_observer_factory);
117
118#ifdef PANZER_HAVE_TEMPUS
119 void setTempusObserverFactory(const Teuchos::RCP<const panzer_stk::TempusObserverFactory>& tempus_observer_factory);
120#endif
121
122 template <typename BuilderT>
123 int addResponse(const std::string & responseName,const std::vector<panzer::WorksetDescriptor> & wkstDesc,const BuilderT & builder);
124
126 const bool write_graphviz_file=false,
127 const std::string& graphviz_file_prefix="");
128
129 Teuchos::RCP<Thyra::ModelEvaluator<ScalarT> > getResponseOnlyModelEvaluator();
130
131 Teuchos::RCP<Thyra::ModelEvaluator<ScalarT> >
133 const Teuchos::RCP<panzer::GlobalData>& global_data,
134#ifdef PANZER_HAVE_TEMPUS
135 const Teuchos::RCP<Piro::TempusSolverForwardOnly<ScalarT> > tempusSolver = Teuchos::null,
136#endif
137 const Teuchos::Ptr<const panzer_stk::NOXObserverFactory> & in_nox_observer_factory=Teuchos::null
138#ifdef PANZER_HAVE_TEMPUS
139 , const Teuchos::Ptr<const panzer_stk::TempusObserverFactory> & in_tempus_observer_factory=Teuchos::null
140#endif
141 );
142
144
146 void setUserWorksetFactory(Teuchos::RCP<panzer_stk::WorksetFactory>& user_wkst_factory);
147
148 Teuchos::RCP<panzer::ResponseLibrary<panzer::Traits> > getResponseLibrary();
149
150 const std::vector<Teuchos::RCP<panzer::PhysicsBlock> > & getPhysicsBlocks() const;
151
153 Teuchos::RCP<panzer_stk::STK_Interface> getMesh() const
154 { return m_mesh; }
155
157 Teuchos::RCP<panzer::GlobalIndexer> getGlobalIndexer() const
158 { return m_global_indexer; }
159
161 Teuchos::RCP<panzer::ConnManager> getConnManager() const
162 { return m_conn_manager; }
163
165 bool isBlockedAssembly() const
166 { return m_blockedAssembly; }
167
169 Teuchos::RCP<panzer::LinearObjFactory<panzer::Traits> > getLinearObjFactory() const
170 { return m_lin_obj_factory; }
171
172 bool isTransient() const
173 { return m_is_transient; }
174
178 Teuchos::RCP<Thyra::ModelEvaluator<double> >
180 const Teuchos::RCP<Teuchos::ParameterList> & physics_block_plist,
181 const Teuchos::RCP<const panzer::EquationSetFactory>& eqset_factory,
182 const panzer::BCStrategyFactory & bc_factory,
184 bool is_transient,bool is_explicit,
185 const Teuchos::Ptr<const Teuchos::ParameterList> & bc_list=Teuchos::null,
186 const Teuchos::RCP<Thyra::ModelEvaluator<ScalarT> > & physics_me=Teuchos::null) const;
187
192 panzer::WorksetContainer & wkstContainer,
193 const std::vector<Teuchos::RCP<panzer::PhysicsBlock> >& physicsBlocks,
196 const Teuchos::ParameterList & closure_pl,
197 const Teuchos::ParameterList & initial_cond_pl,
198 const Teuchos::ParameterList & user_data_pl,
199 bool write_dot_files,const std::string & dot_file_prefix) const;
200
205 const std::vector<Teuchos::RCP<panzer::PhysicsBlock> >& physicsBlocks,
206 const Teuchos::RCP<panzer::WorksetContainer> & wc,
207 const Teuchos::RCP<const panzer::GlobalIndexer> & ugi,
208 const Teuchos::RCP<const panzer::LinearObjFactory<panzer::Traits> > & lof,
209 const Teuchos::RCP<panzer_stk::STK_Interface> & mesh,
211 const Teuchos::ParameterList & closure_model_pl,
212 const Teuchos::ParameterList & user_data_pl,
213 int workset_size) const;
214
217 Teuchos::RCP<Thyra::ModelEvaluatorDefaultBase<double> >
218 buildPhysicsModelEvaluator(bool buildThyraME,
219 const Teuchos::RCP<panzer::FieldManagerBuilder> & fmb,
220 const Teuchos::RCP<panzer::ResponseLibrary<panzer::Traits> > & rLibrary,
221 const Teuchos::RCP<panzer::LinearObjFactory<panzer::Traits> > & lof,
222 const std::vector<Teuchos::RCP<Teuchos::Array<std::string> > > & p_names,
223 const std::vector<Teuchos::RCP<Teuchos::Array<double> > > & p_values,
224 const Teuchos::RCP<Thyra::LinearOpWithSolveFactoryBase<ScalarT> > & solverFactory,
225 const Teuchos::RCP<panzer::GlobalData> & global_data,
226 bool is_transient,double t_init) const;
227
228
230 { return useDynamicCoordinates_; }
231
237 double getInitialTime(Teuchos::ParameterList& transient_ic_params,
238 const panzer_stk::STK_Interface& mesh) const;
239
240 Teuchos::RCP<Thyra::LinearOpWithSolveFactoryBase<double> >
241 buildLOWSFactory(bool blockedAssembly,
242 const Teuchos::RCP<const panzer::GlobalIndexer> & globalIndexer,
243 const Teuchos::RCP<panzer::ConnManager> & conn_manager,
244 const Teuchos::RCP<panzer_stk::STK_Interface> & mesh,
245 const Teuchos::RCP<const Teuchos::MpiComm<int> > & mpi_comm
246 #ifdef PANZER_HAVE_TEKO
247 , const Teuchos::RCP<Teko::RequestHandler> & req_handler=Teuchos::null
248 #endif
249 ) const;
250
252 Teuchos::RCP<panzer::WorksetContainer> getWorksetContainer() const
253 { return m_wkstContainer; }
254
256 void addUserFieldsToMesh(panzer_stk::STK_Interface & mesh,const Teuchos::ParameterList & output_list) const;
257
259 Teuchos::RCP<STK_MeshFactory> buildSTKMeshFactory(const Teuchos::ParameterList & mesh_params) const;
260
261 void finalizeMeshConstruction(const STK_MeshFactory & mesh_factory,
262 const std::vector<Teuchos::RCP<panzer::PhysicsBlock> > & physicsBlocks,
263 const Teuchos::MpiComm<int> mpi_comm,
264 STK_Interface & mesh) const;
265
266 protected:
267
268 Teuchos::RCP<panzer::FieldManagerBuilder>
269 buildFieldManagerBuilder(const Teuchos::RCP<panzer::WorksetContainer> & wc,
270 const std::vector<Teuchos::RCP<panzer::PhysicsBlock> >& physicsBlocks,
271 const std::vector<panzer::BC> & bcs,
272 const panzer::EquationSetFactory & eqset_factory,
273 const panzer::BCStrategyFactory& bc_factory,
276 const Teuchos::ParameterList& closure_models,
278 const Teuchos::ParameterList& user_data,
279 bool writeGraph,const std::string & graphPrefix,
280 bool write_field_managers,const std::string & field_manager_prefix) const;
281
284 Teuchos::RCP<panzer::ResponseLibrary<panzer::Traits> > initializeSolnWriterResponseLibrary(
285 const Teuchos::RCP<panzer::WorksetContainer> & wc,
286 const Teuchos::RCP<const panzer::GlobalIndexer> & ugi,
287 const Teuchos::RCP<const panzer::LinearObjFactory<panzer::Traits> > & lof,
288 const Teuchos::RCP<panzer_stk::STK_Interface> & mesh) const;
289
293 const std::vector<Teuchos::RCP<panzer::PhysicsBlock> > & physicsBlocks,
295 const Teuchos::ParameterList & closure_models,
296 int workset_size, Teuchos::ParameterList & user_data) const;
297
298 void registerMeshWithClosureModelFactories(const Teuchos::RCP<panzer_stk::STK_Interface>& mesh,
300 private:
301
302 Teuchos::RCP<Thyra::ModelEvaluator<ScalarT> > m_physics_me;
303 Teuchos::RCP<Thyra::ModelEvaluator<ScalarT> > m_rome_me;
304
305 Teuchos::RCP<panzer::ResponseLibrary<panzer::Traits> > m_response_library;
306 std::vector<Teuchos::RCP<panzer::PhysicsBlock> > m_physics_blocks;
307
308 Teuchos::RCP<panzer_stk::STK_Interface> m_mesh;
309 Teuchos::RCP<panzer::GlobalIndexer> m_global_indexer;
310 Teuchos::RCP<panzer::ConnManager> m_conn_manager;
311 Teuchos::RCP<panzer::LinearObjFactory<panzer::Traits> > m_lin_obj_factory;
312 Teuchos::RCP<panzer::GlobalData> m_global_data;
316 Teuchos::RCP<const panzer::EquationSetFactory> m_eqset_factory;
317
318 Teuchos::RCP<const panzer_stk::NOXObserverFactory> m_nox_observer_factory;
319#ifdef PANZER_HAVE_TEMPUS
320 Teuchos::RCP<const panzer_stk::TempusObserverFactory> m_tempus_observer_factory;
321#endif
322 Teuchos::RCP<panzer_stk::WorksetFactory> m_user_wkst_factory;
323 Teuchos::RCP<panzer::WorksetContainer> m_wkstContainer;
324
326 Teuchos::RCP<Teuchos::ParameterList> m_stratimikos_params;
327 };
328
329template<typename ScalarT>
330template <typename BuilderT>
332addResponse(const std::string & responseName,const std::vector<panzer::WorksetDescriptor> & wkstDesc,const BuilderT & builder)
333{
334 typedef panzer::ModelEvaluator<double> PanzerME;
335
336#ifdef PANZER_HAVE_EPETRA_STACK
337 Teuchos::RCP<Thyra::EpetraModelEvaluator> thyra_ep_me = Teuchos::rcp_dynamic_cast<Thyra::EpetraModelEvaluator>(m_physics_me);
338 Teuchos::RCP<PanzerME> panzer_me = Teuchos::rcp_dynamic_cast<PanzerME>(m_physics_me);
339
340 if(thyra_ep_me!=Teuchos::null && panzer_me==Teuchos::null) {
341 // I don't need no const-ness!
342 Teuchos::RCP<EpetraExt::ModelEvaluator> ep_me = Teuchos::rcp_const_cast<EpetraExt::ModelEvaluator>(thyra_ep_me->getEpetraModel());
343 Teuchos::RCP<panzer::ModelEvaluator_Epetra> ep_panzer_me = Teuchos::rcp_dynamic_cast<panzer::ModelEvaluator_Epetra>(ep_me);
344
345 return ep_panzer_me->addResponse(responseName,wkstDesc,builder);
346 }
347 else if(panzer_me!=Teuchos::null && thyra_ep_me==Teuchos::null) {
348 return panzer_me->addResponse(responseName,wkstDesc,builder);
349 }
350#else
351 Teuchos::RCP<PanzerME> panzer_me = Teuchos::rcp_dynamic_cast<PanzerME>(m_physics_me);
352 if(panzer_me!=Teuchos::null) {
353 return panzer_me->addResponse(responseName,wkstDesc,builder);
354 }
355#endif
356
357 TEUCHOS_ASSERT(false);
358 return -1;
359}
360
361}
362
363#endif
Class that provides access to worksets on each element block and side set.
Teuchos::RCP< Thyra::LinearOpWithSolveFactoryBase< double > > buildLOWSFactory(bool blockedAssembly, const Teuchos::RCP< const panzer::GlobalIndexer > &globalIndexer, const Teuchos::RCP< panzer::ConnManager > &conn_manager, const Teuchos::RCP< panzer_stk::STK_Interface > &mesh, const Teuchos::RCP< const Teuchos::MpiComm< int > > &mpi_comm) const
Teuchos::RCP< panzer::ResponseLibrary< panzer::Traits > > getResponseLibrary()
Teuchos::RCP< panzer::ResponseLibrary< panzer::Traits > > initializeSolnWriterResponseLibrary(const Teuchos::RCP< panzer::WorksetContainer > &wc, const Teuchos::RCP< const panzer::GlobalIndexer > &ugi, const Teuchos::RCP< const panzer::LinearObjFactory< panzer::Traits > > &lof, const Teuchos::RCP< panzer_stk::STK_Interface > &mesh) const
void registerMeshWithClosureModelFactories(const Teuchos::RCP< panzer_stk::STK_Interface > &mesh, panzer::ClosureModelFactory_TemplateManager< panzer::Traits > &user_cm_factory)
Teuchos::RCP< panzer_stk::WorksetFactory > m_user_wkst_factory
Teuchos::RCP< panzer::FieldManagerBuilder > buildFieldManagerBuilder(const Teuchos::RCP< panzer::WorksetContainer > &wc, const std::vector< Teuchos::RCP< panzer::PhysicsBlock > > &physicsBlocks, const std::vector< panzer::BC > &bcs, const panzer::EquationSetFactory &eqset_factory, const panzer::BCStrategyFactory &bc_factory, const panzer::ClosureModelFactory_TemplateManager< panzer::Traits > &volume_cm_factory, const panzer::ClosureModelFactory_TemplateManager< panzer::Traits > &bc_cm_factory, const Teuchos::ParameterList &closure_models, const panzer::LinearObjFactory< panzer::Traits > &lo_factory, const Teuchos::ParameterList &user_data, bool writeGraph, const std::string &graphPrefix, bool write_field_managers, const std::string &field_manager_prefix) const
Teuchos::RCP< const panzer_stk::NOXObserverFactory > m_nox_observer_factory
Teuchos::RCP< panzer_stk::STK_Interface > m_mesh
double getInitialTime(Teuchos::ParameterList &transient_ic_params, const panzer_stk::STK_Interface &mesh) const
Gets the initial time from either the input parameter list or an exodus file.
void finalizeMeshConstruction(const STK_MeshFactory &mesh_factory, const std::vector< Teuchos::RCP< panzer::PhysicsBlock > > &physicsBlocks, const Teuchos::MpiComm< int > mpi_comm, STK_Interface &mesh) const
Teuchos::RCP< Thyra::ModelEvaluator< ScalarT > > getResponseOnlyModelEvaluator()
void buildObjects(const Teuchos::RCP< const Teuchos::Comm< int > > &comm, const Teuchos::RCP< panzer::GlobalData > &global_data, const Teuchos::RCP< const panzer::EquationSetFactory > &eqset_factory, const panzer::BCStrategyFactory &bc_factory, const panzer::ClosureModelFactory_TemplateManager< panzer::Traits > &cm_factory, bool meConstructionOn=true)
Builds the model evaluators for a panzer assembly.
void addUserFieldsToMesh(panzer_stk::STK_Interface &mesh, const Teuchos::ParameterList &output_list) const
Add the user fields specified by output_list to the mesh.
Teuchos::RCP< panzer::GlobalIndexer > getGlobalIndexer() const
Get global indexer used to build model evaluator.
Teuchos::RCP< const panzer::EquationSetFactory > m_eqset_factory
Teuchos::RCP< Thyra::ModelEvaluator< double > > cloneWithNewPhysicsBlocks(const Teuchos::RCP< Thyra::LinearOpWithSolveFactoryBase< ScalarT > > &solverFactory, const Teuchos::RCP< Teuchos::ParameterList > &physics_block_plist, const Teuchos::RCP< const panzer::EquationSetFactory > &eqset_factory, const panzer::BCStrategyFactory &bc_factory, const panzer::ClosureModelFactory_TemplateManager< panzer::Traits > &user_cm_factory, bool is_transient, bool is_explicit, const Teuchos::Ptr< const Teuchos::ParameterList > &bc_list=Teuchos::null, const Teuchos::RCP< Thyra::ModelEvaluator< ScalarT > > &physics_me=Teuchos::null) const
Teuchos::RCP< panzer::ResponseLibrary< panzer::Traits > > m_response_library
Teuchos::RCP< panzer::WorksetContainer > getWorksetContainer() const
Get the workset container associated with the mesh database.
Teuchos::RCP< Thyra::ModelEvaluator< ScalarT > > buildResponseOnlyModelEvaluator(const Teuchos::RCP< Thyra::ModelEvaluator< ScalarT > > &thyra_me, const Teuchos::RCP< panzer::GlobalData > &global_data, const Teuchos::Ptr< const panzer_stk::NOXObserverFactory > &in_nox_observer_factory=Teuchos::null)
Teuchos::RCP< panzer::ConnManager > m_conn_manager
void buildResponses(const panzer::ClosureModelFactory_TemplateManager< panzer::Traits > &cm_factory, const bool write_graphviz_file=false, const std::string &graphviz_file_prefix="")
void setStratimikosList(const Teuchos::RCP< Teuchos::ParameterList > &paramList)
Set the Stratimikos Linear Solver sublist used to create the LinearOpWithSolve factory.
void setParameterList(Teuchos::RCP< Teuchos::ParameterList > const &paramList)
void setupInitialConditions(Thyra::ModelEvaluator< ScalarT > &model, panzer::WorksetContainer &wkstContainer, const std::vector< Teuchos::RCP< panzer::PhysicsBlock > > &physicsBlocks, const panzer::ClosureModelFactory_TemplateManager< panzer::Traits > &cm_factory, const panzer::LinearObjFactory< panzer::Traits > &lof, const Teuchos::ParameterList &closure_pl, const Teuchos::ParameterList &initial_cond_pl, const Teuchos::ParameterList &user_data_pl, bool write_dot_files, const std::string &dot_file_prefix) const
Setup the initial conditions in a model evaluator. Note that this is entirely self contained.
Teuchos::RCP< panzer::WorksetContainer > m_wkstContainer
void setUserWorksetFactory(Teuchos::RCP< panzer_stk::WorksetFactory > &user_wkst_factory)
Set user defined workset factory.
const std::vector< Teuchos::RCP< panzer::PhysicsBlock > > & getPhysicsBlocks() const
std::vector< Teuchos::RCP< panzer::PhysicsBlock > > m_physics_blocks
Teuchos::RCP< Thyra::ModelEvaluator< ScalarT > > m_rome_me
Teuchos::RCP< Thyra::ModelEvaluator< ScalarT > > getPhysicsModelEvaluator()
Teuchos::RCP< Teuchos::ParameterList > m_stratimikos_params
Teuchos::RCP< panzer_stk::STK_Interface > getMesh() const
Get mesh object used to build model evaluator.
Teuchos::RCP< panzer::LinearObjFactory< panzer::Traits > > m_lin_obj_factory
Teuchos::RCP< panzer::GlobalIndexer > m_global_indexer
Teuchos::RCP< panzer::GlobalData > m_global_data
Teuchos::RCP< panzer::LinearObjFactory< panzer::Traits > > getLinearObjFactory() const
Get linear object factory used to build model evaluator.
Teuchos::RCP< STK_MeshFactory > buildSTKMeshFactory(const Teuchos::ParameterList &mesh_params) const
build STK mesh factory from a mesh parameter list
void setNOXObserverFactory(const Teuchos::RCP< const panzer_stk::NOXObserverFactory > &nox_observer_factory)
void finalizeSolnWriterResponseLibrary(panzer::ResponseLibrary< panzer::Traits > &rl, const std::vector< Teuchos::RCP< panzer::PhysicsBlock > > &physicsBlocks, const panzer::ClosureModelFactory_TemplateManager< panzer::Traits > &cm_factory, const Teuchos::ParameterList &closure_models, int workset_size, Teuchos::ParameterList &user_data) const
Teuchos::RCP< Thyra::ModelEvaluatorDefaultBase< double > > buildPhysicsModelEvaluator(bool buildThyraME, const Teuchos::RCP< panzer::FieldManagerBuilder > &fmb, const Teuchos::RCP< panzer::ResponseLibrary< panzer::Traits > > &rLibrary, const Teuchos::RCP< panzer::LinearObjFactory< panzer::Traits > > &lof, const std::vector< Teuchos::RCP< Teuchos::Array< std::string > > > &p_names, const std::vector< Teuchos::RCP< Teuchos::Array< double > > > &p_values, const Teuchos::RCP< Thyra::LinearOpWithSolveFactoryBase< ScalarT > > &solverFactory, const Teuchos::RCP< panzer::GlobalData > &global_data, bool is_transient, double t_init) const
Teuchos::RCP< panzer::ConnManager > getConnManager() const
Get connection manager.
int addResponse(const std::string &responseName, const std::vector< panzer::WorksetDescriptor > &wkstDesc, const BuilderT &builder)
Teuchos::RCP< const Teuchos::ParameterList > getValidParameters() const
Teuchos::RCP< Thyra::ModelEvaluator< ScalarT > > m_physics_me
void writeInitialConditions(const Thyra::ModelEvaluator< ScalarT > &model, const std::vector< Teuchos::RCP< panzer::PhysicsBlock > > &physicsBlocks, const Teuchos::RCP< panzer::WorksetContainer > &wc, const Teuchos::RCP< const panzer::GlobalIndexer > &ugi, const Teuchos::RCP< const panzer::LinearObjFactory< panzer::Traits > > &lof, const Teuchos::RCP< panzer_stk::STK_Interface > &mesh, const panzer::ClosureModelFactory_TemplateManager< panzer::Traits > &cm_factory, const Teuchos::ParameterList &closure_model_pl, const Teuchos::ParameterList &user_data_pl, int workset_size) const
Write the initial conditions to exodus. Note that this is entirely self contained.
Interface for constructing a BCStrategy_TemplateManager.
Allocates and initializes an equation set template manager.