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Xpetra_CrsMatrix.hpp
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1// @HEADER
2// *****************************************************************************
3// Xpetra: A linear algebra interface package
4//
5// Copyright 2012 NTESS and the Xpetra contributors.
6// SPDX-License-Identifier: BSD-3-Clause
7// *****************************************************************************
8// @HEADER
9
10#ifndef XPETRA_CRSMATRIX_HPP
11#define XPETRA_CRSMATRIX_HPP
12
13/* this file is automatically generated - do not edit (see script/interfaces.py) */
14
15#include <Tpetra_KokkosCompat_DefaultNode.hpp>
16#include "Xpetra_ConfigDefs.hpp"
17#include "Xpetra_RowMatrix.hpp"
18#include "Xpetra_DistObject.hpp"
19#include "Xpetra_CrsGraph.hpp"
20#include "Xpetra_Vector.hpp"
21
22#ifdef HAVE_XPETRA_TPETRA
23#include <KokkosSparse_StaticCrsGraph.hpp>
24#include <KokkosSparse_CrsMatrix.hpp>
25#endif
26
27namespace Xpetra {
28
29template <class Scalar,
30 class LocalOrdinal,
31 class GlobalOrdinal,
32 class Node = Tpetra::KokkosClassic::DefaultNode::DefaultNodeType>
34 : public RowMatrix<Scalar, LocalOrdinal, GlobalOrdinal, Node>,
35 public DistObject<char, LocalOrdinal, GlobalOrdinal, Node> {
36 public:
37 typedef Scalar scalar_type;
38 typedef LocalOrdinal local_ordinal_type;
39 typedef GlobalOrdinal global_ordinal_type;
40 typedef Node node_type;
41
43
44
46 virtual ~CrsMatrix() {}
47
49
51
53 virtual void
54 insertGlobalValues(GlobalOrdinal globalRow,
56 const ArrayView<const Scalar> &vals) = 0;
57
59 virtual void insertLocalValues(LocalOrdinal localRow, const ArrayView<const LocalOrdinal> &cols, const ArrayView<const Scalar> &vals) = 0;
60
62 virtual void replaceGlobalValues(GlobalOrdinal globalRow, const ArrayView<const GlobalOrdinal> &cols, const ArrayView<const Scalar> &vals) = 0;
63
65 virtual void replaceLocalValues(LocalOrdinal localRow, const ArrayView<const LocalOrdinal> &cols, const ArrayView<const Scalar> &vals) = 0;
66
68 virtual void setAllToScalar(const Scalar &alpha) = 0;
69
71 virtual void scale(const Scalar &alpha) = 0;
72
83 virtual void allocateAllValues(size_t numNonZeros, ArrayRCP<size_t> &rowptr, ArrayRCP<LocalOrdinal> &colind, ArrayRCP<Scalar> &values) = 0;
84
86 virtual void setAllValues(const ArrayRCP<size_t> &rowptr, const ArrayRCP<LocalOrdinal> &colind, const ArrayRCP<Scalar> &values) = 0;
87
90
92 virtual void getAllValues(ArrayRCP<Scalar> &values) = 0;
93
95
97
98
100 virtual void resumeFill(const RCP<ParameterList> &params = null) = 0;
101
103 virtual void fillComplete(const RCP<const Map<LocalOrdinal, GlobalOrdinal, Node> > &domainMap, const RCP<const Map<LocalOrdinal, GlobalOrdinal, Node> > &rangeMap, const RCP<ParameterList> &params = null) = 0;
104
106 virtual void fillComplete(const RCP<ParameterList> &params = null) = 0;
107
110
113 const RCP<const Map<LocalOrdinal, GlobalOrdinal, Node> > &rangeMap,
114 const RCP<const Import<LocalOrdinal, GlobalOrdinal, Node> > &importer = Teuchos::null,
115 const RCP<const Export<LocalOrdinal, GlobalOrdinal, Node> > &exporter = Teuchos::null,
116 const RCP<ParameterList> &params = Teuchos::null) = 0;
118
120
121
124
127
130
132 virtual global_size_t getGlobalNumRows() const = 0;
133
135 virtual global_size_t getGlobalNumCols() const = 0;
136
138 virtual size_t getLocalNumRows() const = 0;
139
142
144 virtual size_t getLocalNumEntries() const = 0;
145
147 virtual size_t getNumEntriesInLocalRow(LocalOrdinal localRow) const = 0;
148
150 virtual size_t getNumEntriesInGlobalRow(GlobalOrdinal globalRow) const = 0;
151
153 virtual size_t getGlobalMaxNumRowEntries() const = 0;
154
156 virtual size_t getLocalMaxNumRowEntries() const = 0;
157
159 virtual bool isLocallyIndexed() const = 0;
160
162 virtual bool isGloballyIndexed() const = 0;
163
165 virtual bool isFillComplete() const = 0;
166
168 virtual bool isFillActive() const = 0;
169
172
174 virtual bool supportsRowViews() const = 0;
175
177 virtual void getGlobalRowView(GlobalOrdinal GlobalRow, ArrayView<const GlobalOrdinal> &indices, ArrayView<const Scalar> &values) const = 0;
178
180 virtual void getGlobalRowCopy(GlobalOrdinal GlobalRow, const ArrayView<GlobalOrdinal> &indices, const ArrayView<Scalar> &values, size_t &numEntries) const = 0;
181
183 virtual void getLocalRowView(LocalOrdinal LocalRow, ArrayView<const LocalOrdinal> &indices, ArrayView<const Scalar> &values) const = 0;
184
187
189 virtual void getLocalDiagOffsets(Teuchos::ArrayRCP<size_t> &offsets) const = 0;
190
193
195 virtual void getLocalDiagCopy(Vector<Scalar, LocalOrdinal, GlobalOrdinal, Node> &diag, const Kokkos::View<const size_t *, typename Node::device_type, Kokkos::MemoryUnmanaged> &offsets) const = 0;
196
199
202
205
207
209 virtual bool haveGlobalConstants() const = 0;
210
212
214
215
229
247 virtual void apply(const MultiVector<Scalar, LocalOrdinal, GlobalOrdinal, Node> &X, MultiVector<Scalar, LocalOrdinal, GlobalOrdinal, Node> &Y, Teuchos::ETransp mode, Scalar alpha, Scalar beta, bool sumInterfaceValues, const RCP<Import<LocalOrdinal, GlobalOrdinal, Node> > &regionInterfaceImporter, const Teuchos::ArrayRCP<LocalOrdinal> &regionInterfaceLIDs) const = 0;
248
251
254
256
258
259
261 virtual std::string description() const = 0;
262
265
267
269
270 virtual void setObjectLabel(const std::string &objectLabel) = 0;
272
274
275#ifdef HAVE_XPETRA_TPETRA
276#if KOKKOS_VERSION >= 40799
277 using impl_scalar_type = typename KokkosKernels::ArithTraits<Scalar>::val_type;
278#else
279 using impl_scalar_type = typename Kokkos::ArithTraits<Scalar>::val_type;
280#endif
281 using execution_space = typename node_type::device_type;
282
283 // that is the local_graph_type in Tpetra::CrsGraph...
284 using local_graph_type = KokkosSparse::StaticCrsGraph<LocalOrdinal,
285 Kokkos::LayoutLeft,
287 void,
288 size_t>;
292 using local_matrix_type = KokkosSparse::CrsMatrix<impl_scalar_type, LocalOrdinal, execution_space, void,
293 typename local_graph_type::size_type>;
294
296#if KOKKOS_VERSION >= 40799
297 virtual typename local_matrix_type::host_mirror_type getLocalMatrixHost() const = 0;
298#else
299 virtual typename local_matrix_type::HostMirror getLocalMatrixHost() const = 0;
300#endif
301
302 virtual void setAllValues(const typename local_matrix_type::row_map_type &ptr,
303 const typename local_graph_type::entries_type::non_const_type &ind,
304 const typename local_matrix_type::values_type &val) = 0;
305#else
306#ifdef __GNUC__
307#warning "Xpetra Kokkos interface for CrsMatrix is enabled (HAVE_XPETRA_KOKKOS_REFACTOR) but Tpetra is disabled. The Kokkos interface needs Tpetra to be enabled, too."
308#endif
309#endif
310
312
313 // Adding these functions by hand, as they're in the skip list.
314
316 virtual size_t getLocalNumCols() const = 0;
317
319 virtual void getLocalRowCopy(LocalOrdinal LocalRow, const ArrayView<LocalOrdinal> &Indices, const ArrayView<Scalar> &Values, size_t &NumEntries) const = 0;
320
322 virtual bool hasMatrix() const = 0;
323
325 virtual LocalOrdinal GetStorageBlockSize() const = 0;
326
331
332}; // CrsMatrix class
333
334} // namespace Xpetra
335
336#define XPETRA_CRSMATRIX_SHORT
337#endif // XPETRA_CRSMATRIX_HPP
static const EVerbosityLevel verbLevel_default
virtual void getLocalDiagOffsets(Teuchos::ArrayRCP< size_t > &offsets) const =0
Get offsets of the diagonal entries in the matrix.
virtual void replaceLocalValues(LocalOrdinal localRow, const ArrayView< const LocalOrdinal > &cols, const ArrayView< const Scalar > &vals)=0
Replace matrix entries, using local IDs.
virtual void replaceDomainMapAndImporter(const Teuchos::RCP< const Map< LocalOrdinal, GlobalOrdinal, Node > > &newDomainMap, Teuchos::RCP< const Import< LocalOrdinal, GlobalOrdinal, Node > > &newImporter)=0
Replaces the current domainMap and importer with the user-specified objects.
virtual RCP< const CrsGraph< LocalOrdinal, GlobalOrdinal, Node > > getCrsGraph() const =0
Returns the CrsGraph associated with this matrix.
virtual size_t getGlobalMaxNumRowEntries() const =0
Returns the maximum number of entries across all rows/columns on all nodes.
virtual void rightScale(const Vector< Scalar, LocalOrdinal, GlobalOrdinal, Node > &x)=0
Right scale matrix using the given vector entries.
virtual void setAllValues(const typename local_matrix_type::row_map_type &ptr, const typename local_graph_type::entries_type::non_const_type &ind, const typename local_matrix_type::values_type &val)=0
virtual void getLocalDiagCopy(Vector< Scalar, LocalOrdinal, GlobalOrdinal, Node > &diag, const Teuchos::ArrayView< const size_t > &offsets) const =0
Get a copy of the diagonal entries owned by this node, with local row indices, using row offsets.
KokkosSparse::CrsMatrix< impl_scalar_type, LocalOrdinal, execution_space, void, typename local_graph_type::size_type > local_matrix_type
The specialization of Kokkos::CrsMatrix that represents the part of the sparse matrix on each MPI pro...
GlobalOrdinal global_ordinal_type
virtual bool isLocallyIndexed() const =0
If matrix indices are in the local range, this function returns true. Otherwise, this function return...
virtual const RCP< const Map< LocalOrdinal, GlobalOrdinal, Node > > getRowMap() const =0
Returns the Map that describes the row distribution in this matrix.
virtual void fillComplete(const RCP< const Map< LocalOrdinal, GlobalOrdinal, Node > > &domainMap, const RCP< const Map< LocalOrdinal, GlobalOrdinal, Node > > &rangeMap, const RCP< ParameterList > &params=null)=0
Signal that data entry is complete, specifying domain and range maps.
virtual void scale(const Scalar &alpha)=0
Scale the current values of a matrix, this = alpha*this.
virtual void residual(const MultiVector< Scalar, LocalOrdinal, GlobalOrdinal, Node > &X, const MultiVector< Scalar, LocalOrdinal, GlobalOrdinal, Node > &B, MultiVector< Scalar, LocalOrdinal, GlobalOrdinal, Node > &R) const =0
Compute a residual R = B - (*this) * X.
virtual std::string description() const =0
A simple one-line description of this object.
virtual void expertStaticFillComplete(const RCP< const Map< LocalOrdinal, GlobalOrdinal, Node > > &domainMap, const RCP< const Map< LocalOrdinal, GlobalOrdinal, Node > > &rangeMap, const RCP< const Import< LocalOrdinal, GlobalOrdinal, Node > > &importer=Teuchos::null, const RCP< const Export< LocalOrdinal, GlobalOrdinal, Node > > &exporter=Teuchos::null, const RCP< ParameterList > &params=Teuchos::null)=0
Expert static fill complete.
virtual size_t getLocalNumRows() const =0
Returns the number of matrix rows owned on the calling node.
virtual ~CrsMatrix()
Destructor.
virtual void setAllValues(const ArrayRCP< size_t > &rowptr, const ArrayRCP< LocalOrdinal > &colind, const ArrayRCP< Scalar > &values)=0
Sets the 1D pointer arrays of the graph.
KokkosSparse::StaticCrsGraph< LocalOrdinal, Kokkos::LayoutLeft, execution_space, void, size_t > local_graph_type
virtual void getLocalRowView(LocalOrdinal LocalRow, ArrayView< const LocalOrdinal > &indices, ArrayView< const Scalar > &values) const =0
Extract a const, non-persisting view of local indices in a specified row of the matrix.
virtual void setObjectLabel(const std::string &objectLabel)=0
virtual void leftScale(const Vector< Scalar, LocalOrdinal, GlobalOrdinal, Node > &x)=0
Left scale matrix using the given vector entries.
virtual void getGlobalRowView(GlobalOrdinal GlobalRow, ArrayView< const GlobalOrdinal > &indices, ArrayView< const Scalar > &values) const =0
Extract a const, non-persisting view of global indices in a specified row of the matrix.
typename Kokkos::ArithTraits< Scalar >::val_type impl_scalar_type
virtual void removeEmptyProcessesInPlace(const RCP< const Map< LocalOrdinal, GlobalOrdinal, Node > > &newMap)=0
virtual void fillComplete(const RCP< ParameterList > &params=null)=0
Signal that data entry is complete.
virtual void setAllToScalar(const Scalar &alpha)=0
Set all matrix entries equal to scalarThis.
virtual const RCP< const Map< LocalOrdinal, GlobalOrdinal, Node > > getRangeMap() const =0
Returns the Map associated with the range of this operator, which must be compatible with Y....
virtual void replaceGlobalValues(GlobalOrdinal globalRow, const ArrayView< const GlobalOrdinal > &cols, const ArrayView< const Scalar > &vals)=0
Replace matrix entries, using global IDs.
virtual size_t getLocalMaxNumRowEntries() const =0
Returns the maximum number of entries across all rows/columns on this node.
virtual size_t getLocalNumEntries() const =0
Returns the local number of entries in this matrix.
virtual void getGlobalRowCopy(GlobalOrdinal GlobalRow, const ArrayView< GlobalOrdinal > &indices, const ArrayView< Scalar > &values, size_t &numEntries) const =0
Extract a list of entries in a specified global row of this matrix. Put into pre-allocated storage.
typename node_type::device_type execution_space
virtual const RCP< const Map< LocalOrdinal, GlobalOrdinal, Node > > getDomainMap() const =0
Returns the Map associated with the domain of this operator. This will be null until fillComplete() i...
virtual ScalarTraits< Scalar >::magnitudeType getFrobeniusNorm() const =0
Returns the Frobenius norm of the matrix.
virtual void getLocalDiagCopy(Vector< Scalar, LocalOrdinal, GlobalOrdinal, Node > &diag, const Kokkos::View< const size_t *, typename Node::device_type, Kokkos::MemoryUnmanaged > &offsets) const =0
Get a copy of the diagonal entries owned by this node, with local row indices, using row offsets.
virtual global_size_t getGlobalNumRows() const =0
Number of global elements in the row map of this matrix.
virtual void describe(Teuchos::FancyOStream &out, const Teuchos::EVerbosityLevel verbLevel=Teuchos::Describable::verbLevel_default) const =0
Print the object with some verbosity level to an FancyOStream object.
virtual local_matrix_type::HostMirror getLocalMatrixHost() const =0
virtual void getLocalRowCopy(LocalOrdinal LocalRow, const ArrayView< LocalOrdinal > &Indices, const ArrayView< Scalar > &Values, size_t &NumEntries) const =0
Extract a list of entries in a specified local row of the matrix. Put into storage allocated by calli...
LocalOrdinal local_ordinal_type
virtual void getLocalDiagCopy(Vector< Scalar, LocalOrdinal, GlobalOrdinal, Node > &diag) const =0
Get a copy of the diagonal entries owned by this node, with local row indices.
virtual bool isFillComplete() const =0
Returns true if the matrix is in compute mode, i.e. if fillComplete() has been called.
virtual global_size_t getGlobalNumEntries() const =0
Returns the global number of entries in this matrix.
virtual bool isGloballyIndexed() const =0
If matrix indices are in the global range, this function returns true. Otherwise, this function retur...
virtual global_size_t getGlobalNumCols() const =0
Number of global columns in the matrix.
virtual void resumeFill(const RCP< ParameterList > &params=null)=0
virtual void insertGlobalValues(GlobalOrdinal globalRow, const ArrayView< const GlobalOrdinal > &cols, const ArrayView< const Scalar > &vals)=0
Insert matrix entries, using global IDs.
virtual bool isFillActive() const =0
Returns true if the matrix is in edit mode.
virtual size_t getLocalNumCols() const =0
Returns the number of matrix columns owned on the calling node.
virtual void replaceDiag(const Vector< Scalar, LocalOrdinal, GlobalOrdinal, Node > &diag)=0
Replace the diagonal entries of the matrix.
virtual size_t getNumEntriesInLocalRow(LocalOrdinal localRow) const =0
Returns the current number of entries on this node in the specified local row.
virtual void apply(const MultiVector< Scalar, LocalOrdinal, GlobalOrdinal, Node > &X, MultiVector< Scalar, LocalOrdinal, GlobalOrdinal, Node > &Y, Teuchos::ETransp mode=Teuchos::NO_TRANS, Scalar alpha=ScalarTraits< Scalar >::one(), Scalar beta=ScalarTraits< Scalar >::zero()) const =0
Computes the sparse matrix-multivector multiplication.
virtual size_t getNumEntriesInGlobalRow(GlobalOrdinal globalRow) const =0
Returns the current number of entries in the specified global row.
virtual bool hasMatrix() const =0
Does this have an underlying matrix.
virtual void insertLocalValues(LocalOrdinal localRow, const ArrayView< const LocalOrdinal > &cols, const ArrayView< const Scalar > &vals)=0
Insert matrix entries, using local IDs.
virtual bool haveGlobalConstants() const =0
Returns true if globalConstants have been computed; false otherwise.
virtual void getAllValues(ArrayRCP< const size_t > &rowptr, ArrayRCP< const LocalOrdinal > &colind, ArrayRCP< const Scalar > &values) const =0
Gets the 1D pointer arrays of the graph.
virtual void apply(const MultiVector< Scalar, LocalOrdinal, GlobalOrdinal, Node > &X, MultiVector< Scalar, LocalOrdinal, GlobalOrdinal, Node > &Y, Teuchos::ETransp mode, Scalar alpha, Scalar beta, bool sumInterfaceValues, const RCP< Import< LocalOrdinal, GlobalOrdinal, Node > > &regionInterfaceImporter, const Teuchos::ArrayRCP< LocalOrdinal > &regionInterfaceLIDs) const =0
Computes the sparse matrix-multivector multiplication for region layout matrices.
virtual void allocateAllValues(size_t numNonZeros, ArrayRCP< size_t > &rowptr, ArrayRCP< LocalOrdinal > &colind, ArrayRCP< Scalar > &values)=0
Allocates and returns ArrayRCPs of the Crs arrays — This is an Xpetra-only routine.
virtual const RCP< const Map< LocalOrdinal, GlobalOrdinal, Node > > getColMap() const =0
Returns the Map that describes the column distribution in this matrix.
virtual LocalOrdinal GetStorageBlockSize() const =0
Returns the block size of the storage mechanism, which is usually 1, except for Tpetra::BlockCrsMatri...
virtual bool supportsRowViews() const =0
Returns true if getLocalRowView() and getGlobalRowView() are valid for this class.
virtual local_matrix_type getLocalMatrixDevice() const =0
virtual void getAllValues(ArrayRCP< Scalar > &values)=0
Gets the 1D pointer arrays of the graph.
size_t global_size_t
Global size_t object.