10#ifndef TPETRA_IMPORT_UTIL2_HPP
11#define TPETRA_IMPORT_UTIL2_HPP
18#include "Tpetra_ConfigDefs.hpp"
19#include "Tpetra_Import.hpp"
20#include "Tpetra_HashTable.hpp"
21#include "Tpetra_Map.hpp"
23#include "Tpetra_Distributor.hpp"
25#include "Tpetra_Vector.hpp"
26#include "Kokkos_DualView.hpp"
27#include "KokkosSparse_SortCrs.hpp"
28#include <Teuchos_Array.hpp>
31#include <Kokkos_Core.hpp>
32#include <Kokkos_UnorderedMap.hpp>
33#include <Kokkos_Sort.hpp>
41struct LocalRemoteCount {
42 size_t numLocalColGIDs;
43 size_t numRemoteColGIDs;
45 KOKKOS_INLINE_FUNCTION
48 , numRemoteColGIDs(0) {}
50 KOKKOS_INLINE_FUNCTION
51 LocalRemoteCount& operator+=(
const LocalRemoteCount& src) {
52 numLocalColGIDs += src.numLocalColGIDs;
53 numRemoteColGIDs += src.numRemoteColGIDs;
63struct reduction_identity<LocalRemoteCount> {
64 KOKKOS_FORCEINLINE_FUNCTION
static LocalRemoteCount sum() {
65 return LocalRemoteCount();
71namespace Import_Util {
75template <
typename Scalar,
typename Ordinal>
77 const Teuchos::ArrayView<Ordinal>& CRS_colind,
78 const Teuchos::ArrayView<Scalar>& CRS_vals);
80template <
typename Ordinal>
82 const Teuchos::ArrayView<Ordinal>& CRS_colind);
84template <
typename rowptr_array_type,
typename colind_array_type,
typename vals_array_type>
86 const colind_array_type& CRS_colind,
87 const vals_array_type& CRS_vals);
89template <
typename rowptr_array_type,
typename colind_array_type>
91 const colind_array_type& CRS_colind);
97template <
typename Scalar,
typename Ordinal>
99 const Teuchos::ArrayView<Ordinal>& CRS_colind,
100 const Teuchos::ArrayView<Scalar>& CRS_vals);
102template <
typename Ordinal>
104 const Teuchos::ArrayView<Ordinal>& CRS_colind);
106template <
class rowptr_view_type,
class colind_view_type,
class vals_view_type>
108 const colind_view_type& CRS_colind,
109 const vals_view_type& CRS_vals);
126template <
typename LocalOrdinal,
typename GlobalOrdinal,
typename Node>
128 const Teuchos::ArrayView<const size_t>& rowptr,
129 const Teuchos::ArrayView<LocalOrdinal>& colind_LID,
130 const Teuchos::ArrayView<GlobalOrdinal>& colind_GID,
132 const Teuchos::ArrayView<const int>& owningPIDs,
133 Teuchos::Array<int>& remotePIDs,
140template <
typename LocalOrdinal,
typename GlobalOrdinal,
typename Node>
142 const Kokkos::View<const size_t*, typename Node::device_type> rowptr_view,
143 const Kokkos::View<LocalOrdinal*, typename Node::device_type> colind_LID_view,
144 const Kokkos::View<GlobalOrdinal*, typename Node::device_type> colind_GID_view,
146 const Kokkos::View<const int*, typename Node::device_type> owningPIDs_view,
147 Teuchos::Array<int>& remotePIDs,
163template <
typename LocalOrdinal,
typename GlobalOrdinal,
typename Node>
165 bool useReverseModeForOwnership,
166 const ::Tpetra::Details::Transfer<LocalOrdinal, GlobalOrdinal, Node>& transferForMigratingData,
167 bool useReverseModeForMigration,
178namespace Import_Util {
180template <
typename PID,
typename GlobalOrdinal>
181bool sort_PID_then_GID(
const std::pair<PID, GlobalOrdinal>& a,
182 const std::pair<PID, GlobalOrdinal>& b) {
183 if (a.first != b.first)
184 return (a.first < b.first);
185 return (a.second < b.second);
188template <
typename PID,
189 typename GlobalOrdinal,
190 typename LocalOrdinal>
191bool sort_PID_then_pair_GID_LID(
const std::pair<PID, std::pair<GlobalOrdinal, LocalOrdinal>>& a,
192 const std::pair<PID, std::pair<GlobalOrdinal, LocalOrdinal>>& b) {
193 if (a.first != b.first)
194 return a.first < b.first;
196 return (a.second.first < b.second.first);
199template <
typename Scalar,
200 typename LocalOrdinal,
201 typename GlobalOrdinal,
203void reverseNeighborDiscovery(
const CrsMatrix<Scalar, LocalOrdinal, GlobalOrdinal, Node>& SourceMatrix,
204 const typename CrsMatrix<Scalar, LocalOrdinal, GlobalOrdinal, Node>::row_ptrs_host_view_type& rowptr,
205 const typename CrsMatrix<Scalar, LocalOrdinal, GlobalOrdinal, Node>::local_inds_host_view_type& colind,
209 Teuchos::ArrayRCP<int>& type3PIDs,
210 Teuchos::ArrayRCP<LocalOrdinal>& type3LIDs,
211 Teuchos::RCP<
const Teuchos::Comm<int>>& rcomm) {
212#ifdef HAVE_TPETRACORE_MPI
213 using ::Tpetra::Details::Behavior;
214 typedef LocalOrdinal LO;
215 typedef GlobalOrdinal GO;
216 typedef std::pair<GO, GO> pidgidpair_t;
218 const std::string prefix{
" Import_Util2::ReverseND:: "};
219 const std::string label(
"IU2::Neighbor");
222 if (MyImporter.is_null())
return;
224 std::ostringstream errstr;
226 auto const comm = MyDomainMap->getComm();
228 MPI_Comm rawComm = getRawMpiComm(*comm);
229 const int MyPID = rcomm->getRank();
237 Distributor& Distor = MyImporter->getDistributor();
238 const size_t NumRecvs = Distor.getNumReceives();
239 const size_t NumSends = Distor.getNumSends();
240 auto RemoteLIDs = MyImporter->getRemoteLIDs();
241 auto const ProcsFrom = Distor.getProcsFrom();
242 auto const ProcsTo = Distor.getProcsTo();
244 auto LengthsFrom = Distor.getLengthsFrom();
245 auto MyColMap = SourceMatrix.getColMap();
246 const size_t numCols = MyColMap->getLocalNumElements();
247 RCP<const Tpetra::Map<LocalOrdinal, GlobalOrdinal, Node>> target = MyImporter->getTargetMap();
251 Teuchos::Array<int> RemotePIDOrder(numCols, -1);
254 for (
size_t i = 0, j = 0; i < NumRecvs; ++i) {
255 for (
size_t k = 0; k < LengthsFrom[i]; ++k) {
256 const int pid = ProcsFrom[i];
258 RemotePIDOrder[RemoteLIDs[j]] = i;
270 Teuchos::Array<int> ReverseSendSizes(NumRecvs, 0);
272 Teuchos::Array<Teuchos::ArrayRCP<pidgidpair_t>> RSB(NumRecvs);
287 Teuchos::Array<std::set<pidgidpair_t>> pidsets(NumRecvs);
290 for (
size_t i = 0; i < NumExportLIDs; i++) {
291 LO lid = ExportLIDs[i];
292 GO exp_pid = ExportPIDs[i];
293 for (
auto j = rowptr[lid]; j < rowptr[lid + 1]; j++) {
294 int pid_order = RemotePIDOrder[colind[j]];
295 if (pid_order != -1) {
296 GO gid = MyColMap->getGlobalElement(colind[j]);
297 auto tpair = pidgidpair_t(exp_pid, gid);
298 pidsets[pid_order].insert(pidsets[pid_order].end(), tpair);
307 for (
auto&& ps : pidsets) {
309 RSB[jj] = Teuchos::arcp(
new pidgidpair_t[s], 0, s,
true);
310 std::copy(ps.begin(), ps.end(), RSB[jj]);
311 ReverseSendSizes[jj] = s;
317 Teuchos::Array<int> ReverseRecvSizes(NumSends, -1);
318 Teuchos::Array<MPI_Request> rawBreq(ProcsFrom.size() + ProcsTo.size(), MPI_REQUEST_NULL);
320 const int mpi_tag_base_ = 3;
323 for (
int i = 0; i < ProcsTo.size(); ++i) {
324 int Rec_Tag = mpi_tag_base_ + ProcsTo[i];
325 int* thisrecv = (
int*)(&ReverseRecvSizes[i]);
326 MPI_Request rawRequest = MPI_REQUEST_NULL;
327 MPI_Irecv(
const_cast<int*
>(thisrecv),
334 rawBreq[mpireq_idx++] = rawRequest;
336 for (
int i = 0; i < ProcsFrom.size(); ++i) {
337 int Send_Tag = mpi_tag_base_ + MyPID;
338 int* mysend = (
int*)(&ReverseSendSizes[i]);
339 MPI_Request rawRequest = MPI_REQUEST_NULL;
347 rawBreq[mpireq_idx++] = rawRequest;
349 Teuchos::Array<MPI_Status> rawBstatus(rawBreq.size());
350#ifdef HAVE_TPETRA_DEBUG
353 MPI_Waitall(rawBreq.size(), rawBreq.getRawPtr(),
354 rawBstatus.getRawPtr());
356#ifdef HAVE_TPETRA_DEBUG
358 errstr << MyPID <<
"sE1 reverseNeighborDiscovery Mpi_Waitall error on send ";
360 std::cerr << errstr.str() << std::flush;
364 int totalexportpairrecsize = 0;
365 for (
size_t i = 0; i < NumSends; ++i) {
366 totalexportpairrecsize += ReverseRecvSizes[i];
367#ifdef HAVE_TPETRA_DEBUG
368 if (ReverseRecvSizes[i] < 0) {
369 errstr << MyPID <<
"E4 reverseNeighborDiscovery: got < 0 for receive size " << ReverseRecvSizes[i] << std::endl;
374 Teuchos::ArrayRCP<pidgidpair_t> AllReverseRecv = Teuchos::arcp(
new pidgidpair_t[totalexportpairrecsize], 0, totalexportpairrecsize,
true);
377 for (
int i = 0; i < ProcsTo.size(); ++i) {
378 int recv_data_size = ReverseRecvSizes[i] * 2;
379 int recvData_MPI_Tag = mpi_tag_base_ * 2 + ProcsTo[i];
380 MPI_Request rawRequest = MPI_REQUEST_NULL;
381 GO* rec_bptr = (GO*)(&AllReverseRecv[offset]);
382 offset += ReverseRecvSizes[i];
385 ::Tpetra::Details::MpiTypeTraits<GO>::getType(rec_bptr[0]),
390 rawBreq[mpireq_idx++] = rawRequest;
392 for (
int ii = 0; ii < ProcsFrom.size(); ++ii) {
393 GO* send_bptr = (GO*)(RSB[ii].getRawPtr());
394 MPI_Request rawSequest = MPI_REQUEST_NULL;
395 int send_data_size = ReverseSendSizes[ii] * 2;
396 int sendData_MPI_Tag = mpi_tag_base_ * 2 + MyPID;
399 ::Tpetra::Details::MpiTypeTraits<GO>::getType(send_bptr[0]),
405 rawBreq[mpireq_idx++] = rawSequest;
407#ifdef HAVE_TPETRA_DEBUG
410 MPI_Waitall(rawBreq.size(),
412 rawBstatus.getRawPtr());
413#ifdef HAVE_TPETRA_DEBUG
415 errstr << MyPID <<
"E3.r reverseNeighborDiscovery Mpi_Waitall error on receive ";
417 std::cerr << errstr.str() << std::flush;
420 std::sort(AllReverseRecv.begin(), AllReverseRecv.end(), Tpetra::Import_Util::sort_PID_then_GID<GlobalOrdinal, GlobalOrdinal>);
422 auto newEndOfPairs = std::unique(AllReverseRecv.begin(), AllReverseRecv.end());
424 if (AllReverseRecv.begin() == newEndOfPairs)
return;
425 int ARRsize = std::distance(AllReverseRecv.begin(), newEndOfPairs);
426 auto rPIDs = Teuchos::arcp(
new int[ARRsize], 0, ARRsize,
true);
427 auto rLIDs = Teuchos::arcp(
new LocalOrdinal[ARRsize], 0, ARRsize,
true);
430 for (
auto itr = AllReverseRecv.begin(); itr != newEndOfPairs; ++itr) {
431 if ((
int)(itr->first) != MyPID) {
432 rPIDs[tsize] = (int)itr->first;
433 LocalOrdinal lid = MyDomainMap->getLocalElement(itr->second);
439 type3PIDs = rPIDs.persistingView(0, tsize);
440 type3LIDs = rLIDs.persistingView(0, tsize);
443 std::cerr << errstr.str() << std::flush;
447 MPI_Abort(MPI_COMM_WORLD, -1);
453template <
typename Scalar,
typename Ordinal>
455 const Teuchos::ArrayView<Ordinal>&
CRS_colind,
456 const Teuchos::ArrayView<Scalar>&
CRS_vals) {
459 auto vals_k = Kokkos::View<Scalar*, Kokkos::HostSpace, Kokkos::MemoryUnmanaged>(
CRS_vals.data(),
CRS_vals.size());
463template <
typename Ordinal>
464void sortCrsEntries(
const Teuchos::ArrayView<size_t>&
CRS_rowptr,
465 const Teuchos::ArrayView<Ordinal>&
CRS_colind) {
471template <
typename rowptr_array_type,
typename colind_array_type,
typename vals_array_type>
472void sortCrsEntries(
const rowptr_array_type& CRS_rowptr,
473 const colind_array_type& CRS_colind,
474 const vals_array_type& CRS_vals) {
475 KokkosSparse::sort_crs_matrix(CRS_rowptr, CRS_colind, CRS_vals);
478template <
typename rowptr_array_type,
typename colind_array_type>
480 const colind_array_type& CRS_colind) {
481 KokkosSparse::sort_crs_graph(CRS_rowptr, CRS_colind);
485template <
typename Scalar,
typename Ordinal>
487 const Teuchos::ArrayView<Ordinal>&
CRS_colind,
488 const Teuchos::ArrayView<Scalar>&
CRS_vals) {
556template <
typename Ordinal>
557void sortAndMergeCrsEntries(
const Teuchos::ArrayView<size_t>&
CRS_rowptr,
558 const Teuchos::ArrayView<Ordinal>&
CRS_colind) {
559 Teuchos::ArrayView<Tpetra::Details::DefaultTypes::scalar_type>
CRS_vals;
563template <
class rowptr_view_type,
class colind_view_type,
class vals_view_type>
564void sortAndMergeCrsEntries(rowptr_view_type& CRS_rowptr,
565 colind_view_type& CRS_colind,
566 vals_view_type& CRS_vals) {
567 using execution_space =
typename vals_view_type::execution_space;
569 auto CRS_rowptr_in = CRS_rowptr;
570 auto CRS_colind_in = CRS_colind;
571 auto CRS_vals_in = CRS_vals;
573 KokkosSparse::sort_and_merge_matrix<execution_space, rowptr_view_type,
574 colind_view_type, vals_view_type>(CRS_rowptr_in, CRS_colind_in, CRS_vals_in,
575 CRS_rowptr, CRS_colind, CRS_vals);
578template <
typename LocalOrdinal,
typename GlobalOrdinal,
typename Node>
579void lowCommunicationMakeColMapAndReindexSerial(
const Teuchos::ArrayView<const size_t>& rowptr,
580 const Teuchos::ArrayView<LocalOrdinal>& colind_LID,
581 const Teuchos::ArrayView<GlobalOrdinal>& colind_GID,
583 const Teuchos::ArrayView<const int>& owningPIDs,
584 Teuchos::Array<int>& remotePIDs,
587 typedef LocalOrdinal LO;
588 typedef GlobalOrdinal GO;
591 const char prefix[] =
"lowCommunicationMakeColMapAndReindexSerial: ";
595 const map_type& domainMap = *domainMapRCP;
600 const size_t numDomainElements = domainMap.getLocalNumElements();
601 Teuchos::Array<bool> LocalGIDs;
602 if (numDomainElements > 0) {
603 LocalGIDs.resize(numDomainElements,
false);
614 const size_t numMyRows = rowptr.size() - 1;
615 const int hashsize = std::max(
static_cast<int>(numMyRows), 100);
618 Teuchos::Array<GO> RemoteGIDList;
619 RemoteGIDList.reserve(hashsize);
620 Teuchos::Array<int> PIDList;
621 PIDList.reserve(hashsize);
632 size_t NumLocalColGIDs = 0;
633 LO NumRemoteColGIDs = 0;
634 for (
size_t i = 0; i < numMyRows; ++i) {
635 for (
size_t j = rowptr[i]; j < rowptr[i + 1]; ++j) {
636 const GO GID = colind_GID[j];
638 const LO LID = domainMap.getLocalElement(GID);
640 const bool alreadyFound = LocalGIDs[LID];
642 LocalGIDs[LID] =
true;
647 const LO hash_value = RemoteGIDs.get(GID);
648 if (hash_value == -1) {
649 const int PID = owningPIDs[j];
650 TEUCHOS_TEST_FOR_EXCEPTION(
651 PID == -1, std::invalid_argument, prefix <<
"Cannot figure out if "
653 colind_LID[j] =
static_cast<LO
>(numDomainElements + NumRemoteColGIDs);
654 RemoteGIDs.add(GID, NumRemoteColGIDs);
655 RemoteGIDList.push_back(GID);
656 PIDList.push_back(PID);
659 colind_LID[j] =
static_cast<LO
>(numDomainElements + hash_value);
667 if (domainMap.getComm()->getSize() == 1) {
670 TEUCHOS_TEST_FOR_EXCEPTION(
671 NumRemoteColGIDs != 0, std::runtime_error, prefix <<
"There is only one "
672 "process in the domain Map's communicator, which means that there are no "
673 "\"remote\" indices. Nevertheless, some column indices are not in the "
675 if (
static_cast<size_t>(NumLocalColGIDs) == numDomainElements) {
679 colMap = domainMapRCP;
686 const LO numMyCols = NumLocalColGIDs + NumRemoteColGIDs;
687 Teuchos::Array<GO> ColIndices;
688 GO* RemoteColIndices = NULL;
690 ColIndices.resize(numMyCols);
691 if (NumLocalColGIDs !=
static_cast<size_t>(numMyCols)) {
692 RemoteColIndices = &ColIndices[NumLocalColGIDs];
696 for (LO i = 0; i < NumRemoteColGIDs; ++i) {
697 RemoteColIndices[i] = RemoteGIDList[i];
701 Teuchos::Array<LO> RemotePermuteIDs(NumRemoteColGIDs);
702 for (LO i = 0; i < NumRemoteColGIDs; ++i) {
703 RemotePermuteIDs[i] = i;
710 ColIndices.begin() + NumLocalColGIDs,
711 RemotePermuteIDs.begin());
717 remotePIDs = PIDList;
726 LO StartCurrent = 0, StartNext = 1;
727 while (StartNext < NumRemoteColGIDs) {
728 if (PIDList[StartNext] == PIDList[StartNext - 1]) {
731 Tpetra::sort2(ColIndices.begin() + NumLocalColGIDs + StartCurrent,
732 ColIndices.begin() + NumLocalColGIDs + StartNext,
733 RemotePermuteIDs.begin() + StartCurrent);
734 StartCurrent = StartNext;
738 Tpetra::sort2(ColIndices.begin() + NumLocalColGIDs + StartCurrent,
739 ColIndices.begin() + NumLocalColGIDs + StartNext,
740 RemotePermuteIDs.begin() + StartCurrent);
743 Teuchos::Array<LO> ReverseRemotePermuteIDs(NumRemoteColGIDs);
744 for (LO i = 0; i < NumRemoteColGIDs; ++i) {
745 ReverseRemotePermuteIDs[RemotePermuteIDs[i]] = i;
749 bool use_local_permute =
false;
750 Teuchos::Array<LO> LocalPermuteIDs(numDomainElements);
762 Teuchos::ArrayView<const GO> domainGlobalElements = domainMap.getLocalElementList();
763 if (
static_cast<size_t>(NumLocalColGIDs) == numDomainElements) {
764 if (NumLocalColGIDs > 0) {
766 std::copy(domainGlobalElements.begin(), domainGlobalElements.end(),
770 LO NumLocalAgain = 0;
771 use_local_permute =
true;
772 for (
size_t i = 0; i < numDomainElements; ++i) {
774 LocalPermuteIDs[i] = NumLocalAgain;
775 ColIndices[NumLocalAgain++] = domainGlobalElements[i];
778 TEUCHOS_TEST_FOR_EXCEPTION(
779 static_cast<size_t>(NumLocalAgain) != NumLocalColGIDs,
780 std::runtime_error, prefix <<
"Local ID count test failed.");
784 const GST minus_one = Teuchos::OrdinalTraits<GST>::invalid();
785 colMap = rcp(
new map_type(minus_one, ColIndices, domainMap.getIndexBase(),
786 domainMap.getComm()));
789 for (
size_t i = 0; i < numMyRows; ++i) {
790 for (
size_t j = rowptr[i]; j < rowptr[i + 1]; ++j) {
791 const LO ID = colind_LID[j];
792 if (
static_cast<size_t>(ID) < numDomainElements) {
793 if (use_local_permute) {
794 colind_LID[j] = LocalPermuteIDs[colind_LID[j]];
800 colind_LID[j] = NumLocalColGIDs + ReverseRemotePermuteIDs[colind_LID[j] - numDomainElements];
806template <
typename LocalOrdinal,
typename GlobalOrdinal,
typename Node>
808 const Teuchos::ArrayView<const size_t>&
rowptr,
809 const Teuchos::ArrayView<LocalOrdinal>&
colind_LID,
810 const Teuchos::ArrayView<GlobalOrdinal>&
colind_GID,
812 const Teuchos::ArrayView<const int>&
owningPIDs,
813 Teuchos::Array<int>& remotePIDs,
815 using DT =
typename Node::device_type;
816 using execution_space =
typename DT::execution_space;
817 execution_space
exec;
836template <
typename LocalOrdinal,
typename GlobalOrdinal,
typename Node>
838 const Kokkos::View<const size_t*, typename Node::device_type>
rowptr_view,
839 const Kokkos::View<LocalOrdinal*, typename Node::device_type>
colind_LID_view,
840 const Kokkos::View<GlobalOrdinal*, typename Node::device_type>
colind_GID_view,
842 const Kokkos::View<const int*, typename Node::device_type>
owningPIDs_view,
843 Teuchos::Array<int>& remotePIDs,
850 const char prefix[] =
"lowCommunicationMakeColMapAndReindex: ";
853 typedef typename Node::device_type DT;
854 using execution_space =
typename DT::execution_space;
855 using memory_space =
typename DT::memory_space;
856 execution_space
exec;
857 using team_policy = Kokkos::TeamPolicy<execution_space, Kokkos::Schedule<Kokkos::Dynamic>>;
858 typedef typename map_type::local_map_type local_map_type;
878 const LO
LINVALID = Teuchos::OrdinalTraits<LO>::invalid();
885 Kokkos::parallel_reduce(
887 const int i =
member.league_rank();
891 Kokkos::parallel_reduce(
900 LocalGIDs_view[LID] = true;
901 innerUpdate.numLocalColGIDs++;
907 innerUpdate.numRemoteColGIDs++;
909 Kokkos::abort(
"Cannot figure out if ID is owned.\n");
930 if (domainMap.getComm()->getSize() == 1) {
935 "process in the domain Map's communicator, which means that there are no "
936 "\"remote\" indices. Nevertheless, some column indices are not in the "
945 auto localColMap = colMap->getLocalMap();
946 Kokkos::parallel_for(
954 Kokkos::View<GO*, DT> RemoteColMapIndices_unsorted(Kokkos::ViewAllocateWithoutInitializing(
"RemoteColMapIndices_unsorted"), NumRemoteColGIDs);
955 Kokkos::View<int*, DT> RemotePIDs_unsorted(Kokkos::ViewAllocateWithoutInitializing(
"RemotePIDs_unsorted"), NumRemoteColGIDs);
962 size_t numEnteredRemotes;
963 Kokkos::parallel_scan(
964 Kokkos::RangePolicy<execution_space>(0, GIDs_map.capacity()), KOKKOS_LAMBDA(
const int i,
size_t& update,
const bool final) {
965 if (GIDs_map.valid_at(i) && GIDs_map.value_at(i) != -1) {
967 RemoteColMapIndices_unsorted(update) = GIDs_map.key_at(i);
968 RemotePIDs_unsorted(update) = GIDs_map.value_at(i);
974 TEUCHOS_ASSERT(numEnteredRemotes == NumRemoteColGIDs);
978 const size_t numMyCols = NumLocalColGIDs + NumRemoteColGIDs;
979 Kokkos::View<GO*, DT> ColMapIndices(Kokkos::ViewAllocateWithoutInitializing(
"ColMapIndices"), numMyCols);
982 if (NumRemoteColGIDs > 0) {
984 auto RemoteColMapIndices_sorted = Kokkos::subview(ColMapIndices, Kokkos::make_pair(NumLocalColGIDs, numMyCols));
987 Kokkos::View<size_t*, memory_space> index(Kokkos::ViewAllocateWithoutInitializing(
"index"), NumRemoteColGIDs);
988 Kokkos::parallel_for(
989 Kokkos::RangePolicy<execution_space>(0, NumRemoteColGIDs), KOKKOS_LAMBDA(
const size_t i) {
993 exec, index, KOKKOS_LAMBDA(
const size_t i,
const size_t j) {
994 auto pid_i = RemotePIDs_unsorted(i);
995 auto pid_j = RemotePIDs_unsorted(j);
997 return RemoteColMapIndices_unsorted(i) < RemoteColMapIndices_unsorted(j);
999 return pid_i < pid_j;
1002 Kokkos::View<int*, memory_space> RemotePIDs_sorted(Kokkos::ViewAllocateWithoutInitializing(
"RemotePIDs_new"), NumRemoteColGIDs);
1003 Kokkos::parallel_for(
1004 Kokkos::RangePolicy<execution_space>(0, NumRemoteColGIDs), KOKKOS_LAMBDA(
const size_t i) {
1005 RemoteColMapIndices_sorted(i) = RemoteColMapIndices_unsorted(index(i));
1006 RemotePIDs_sorted(i) = RemotePIDs_unsorted(index(i));
1011 Teuchos::Array<int> PIDList(NumRemoteColGIDs);
1012 Kokkos::View<int*, Kokkos::HostSpace> RemotePIDs_sorted_host(PIDList.data(), NumRemoteColGIDs);
1013 Kokkos::deep_copy(exec, RemotePIDs_sorted_host, RemotePIDs_sorted);
1016 remotePIDs = PIDList;
1031 if (
static_cast<size_t>(NumLocalColGIDs) == numDomainElements) {
1032 if (NumLocalColGIDs > 0) {
1034 auto LocalColMapIndices = Kokkos::subview(ColMapIndices, Kokkos::make_pair((
size_t)0, numDomainElements));
1035 Kokkos::deep_copy(LocalColMapIndices, domainMap.getMyGlobalIndicesDevice());
1039 LO NumLocalAgain = 0;
1040 Kokkos::parallel_scan(
1041 Kokkos::RangePolicy<execution_space>(0, numDomainElements), KOKKOS_LAMBDA(
const int i, LO& update,
const bool final) {
1042 if (LocalGIDs_view(i)) {
1044 ColMapIndices(update) = domainMap_local.getGlobalElement(i);
1051 TEUCHOS_TEST_FOR_EXCEPTION(
1052 static_cast<size_t>(NumLocalAgain) != NumLocalColGIDs,
1053 std::runtime_error, prefix <<
"Local ID count test failed.");
1057 const GST minus_one = Teuchos::OrdinalTraits<GST>::invalid();
1059 colMap = rcp(
new map_type(minus_one, ColMapIndices, domainMap.getIndexBase(),
1060 domainMap.getComm()));
1063 auto localColMap = colMap->getLocalMap();
1064 Kokkos::parallel_for(
1065 Kokkos::RangePolicy<execution_space>(0, colind_GID_view.size()), KOKKOS_LAMBDA(
const int i) {
1066 colind_LID_view(i) = localColMap.getLocalElement(colind_GID_view(i));
1083template <
typename LocalOrdinal,
typename GlobalOrdinal,
typename Node>
1099#ifdef HAVE_TPETRA_DEBUG
1110 Teuchos::ArrayRCP<int>
pids =
temp.getDataNonConst();
1113 TEUCHOS_TEST_FOR_EXCEPTION(1, std::runtime_error,
"Tpetra::Import_Util::getTwoTransferOwnershipVector owner must be 1-to-1");
1117 TEUCHOS_TEST_FOR_EXCEPTION(1, std::runtime_error,
"Tpetra::Import_Util::getTwoTransferOwnershipVector this option not yet implemented");
1119 TEUCHOS_TEST_FOR_EXCEPTION(1, std::runtime_error,
"Tpetra::Import_Util::getTwoTransferOwnershipVector owner must be 1-to-1");
Declaration of the Tpetra::CrsMatrix class.
Add specializations of Teuchos::Details::MpiTypeTraits for Kokkos::complex<float> and Kokkos::complex...
Declaration of Tpetra::Details::Profiling, a scope guard for Kokkos Profiling.
Functions that wrap Kokkos::create_mirror_view, in order to avoid deep copies when not necessary,...
void lowCommunicationMakeColMapAndReindex(const Teuchos::ArrayView< const size_t > &rowptr, const Teuchos::ArrayView< LocalOrdinal > &colind_LID, const Teuchos::ArrayView< GlobalOrdinal > &colind_GID, const Teuchos::RCP< const Tpetra::Map< LocalOrdinal, GlobalOrdinal, Node > > &domainMapRCP, const Teuchos::ArrayView< const int > &owningPIDs, Teuchos::Array< int > &remotePIDs, Teuchos::RCP< const Tpetra::Map< LocalOrdinal, GlobalOrdinal, Node > > &colMap)
lowCommunicationMakeColMapAndReindex
void getTwoTransferOwnershipVector(const ::Tpetra::Details::Transfer< LocalOrdinal, GlobalOrdinal, Node > &transferThatDefinesOwnership, bool useReverseModeForOwnership, const ::Tpetra::Details::Transfer< LocalOrdinal, GlobalOrdinal, Node > &transferForMigratingData, bool useReverseModeForMigration, Tpetra::Vector< int, LocalOrdinal, GlobalOrdinal, Node > &owningPIDs)
Generates an list of owning PIDs based on two transfer (aka import/export objects) Let: OwningMap = u...
void sortAndMergeCrsEntries(const Teuchos::ArrayView< size_t > &CRS_rowptr, const Teuchos::ArrayView< Ordinal > &CRS_colind, const Teuchos::ArrayView< Scalar > &CRS_vals)
Sort and merge the entries of the (raw CSR) matrix by column index within each row.
void sortCrsEntries(const Teuchos::ArrayView< size_t > &CRS_rowptr, const Teuchos::ArrayView< Ordinal > &CRS_colind, const Teuchos::ArrayView< Scalar > &CRS_vals)
Sort the entries of the (raw CSR) matrix by column index within each row.
void getPids(const Tpetra::Import< LocalOrdinal, GlobalOrdinal, Node > &Importer, Teuchos::Array< int > &pids, bool use_minus_one_for_local)
Like getPidGidPairs, but just gets the PIDs, ordered by the column Map.
Stand-alone utility functions and macros.
Struct that holds views of the contents of a CrsMatrix.
Common base class of Import and Export.
Teuchos::ArrayView< const LO > getExportLIDs() const
List of entries in the source Map that will be sent to other processes.
size_t getNumExportIDs() const
Number of entries that must be sent by the calling process to other processes.
Teuchos::ArrayView< const int > getExportPIDs() const
List of processes to which entries will be sent.
Impl::CreateMirrorViewFromUnmanagedHostArray< ValueType, OutputDeviceType >::output_view_type create_mirror_view_from_raw_host_array(const OutputDeviceType &, ValueType *inPtr, const size_t inSize, const bool copy=true, const char label[]="")
Variant of Kokkos::create_mirror_view that takes a raw host 1-d array as input.
Namespace Tpetra contains the class and methods constituting the Tpetra library.
void sort2(const IT1 &first1, const IT1 &last1, const IT2 &first2, const bool stableSort=false)
Sort the first array, and apply the resulting permutation to the second array.
void sort3(const IT1 &first1, const IT1 &last1, const IT2 &first2, const IT3 &first3, const bool stableSort=false)
Sort the first array, and apply the same permutation to the second and third arrays.
@ REPLACE
Replace existing values with new values.