10#ifndef TPETRA_IMPORT_UTIL2_HPP
11#define TPETRA_IMPORT_UTIL2_HPP
18#include "Tpetra_ConfigDefs.hpp"
19#include "Tpetra_Import.hpp"
20#include "Tpetra_HashTable.hpp"
21#include "Tpetra_Map.hpp"
23#include "Tpetra_Distributor.hpp"
25#include "Tpetra_Vector.hpp"
26#include "Kokkos_DualView.hpp"
27#include "KokkosSparse_SortCrs.hpp"
28#include <Teuchos_Array.hpp>
31#include <Kokkos_Core.hpp>
32#include <Kokkos_UnorderedMap.hpp>
33#include <Kokkos_Sort.hpp>
41struct LocalRemoteCount {
42 size_t numLocalColGIDs;
43 size_t numRemoteColGIDs;
45 KOKKOS_INLINE_FUNCTION
48 , numRemoteColGIDs(0) {}
50 KOKKOS_INLINE_FUNCTION
51 LocalRemoteCount& operator+=(
const LocalRemoteCount& src) {
52 numLocalColGIDs += src.numLocalColGIDs;
53 numRemoteColGIDs += src.numRemoteColGIDs;
63struct reduction_identity<LocalRemoteCount> {
64 KOKKOS_FORCEINLINE_FUNCTION
static LocalRemoteCount sum() {
65 return LocalRemoteCount();
71namespace Import_Util {
75template <
typename Scalar,
typename Ordinal>
77 const Teuchos::ArrayView<Ordinal>& CRS_colind,
78 const Teuchos::ArrayView<Scalar>& CRS_vals,
79 const ::KokkosSparse::SortAlgorithm option = ::KokkosSparse::SortAlgorithm::DEFAULT);
81template <
typename Ordinal>
83 const Teuchos::ArrayView<Ordinal>& CRS_colind,
84 const ::KokkosSparse::SortAlgorithm option = ::KokkosSparse::SortAlgorithm::DEFAULT);
86template <
typename rowptr_array_type,
typename colind_array_type,
typename vals_array_type>
88 const colind_array_type& CRS_colind,
89 const vals_array_type& CRS_vals,
90 const ::KokkosSparse::SortAlgorithm option = ::KokkosSparse::SortAlgorithm::DEFAULT);
92template <
typename rowptr_array_type,
typename colind_array_type>
94 const colind_array_type& CRS_colind,
95 const ::KokkosSparse::SortAlgorithm option = ::KokkosSparse::SortAlgorithm::DEFAULT);
101template <
typename Scalar,
typename Ordinal>
103 const Teuchos::ArrayView<Ordinal>& CRS_colind,
104 const Teuchos::ArrayView<Scalar>& CRS_vals);
106template <
typename Ordinal>
108 const Teuchos::ArrayView<Ordinal>& CRS_colind);
110template <
class rowptr_view_type,
class colind_view_type,
class vals_view_type>
112 colind_view_type& CRS_colind,
113 vals_view_type& CRS_vals,
114 const ::KokkosSparse::SortAlgorithm option);
131template <
typename LocalOrdinal,
typename GlobalOrdinal,
typename Node>
133 const Teuchos::ArrayView<const size_t>& rowptr,
134 const Teuchos::ArrayView<LocalOrdinal>& colind_LID,
135 const Teuchos::ArrayView<GlobalOrdinal>& colind_GID,
137 const Teuchos::ArrayView<const int>& owningPIDs,
138 Teuchos::Array<int>& remotePIDs,
140 const Teuchos::RCP<Teuchos::ParameterList>& params = Teuchos::null);
146template <
typename LocalOrdinal,
typename GlobalOrdinal,
typename Node>
148 const Kokkos::View<const size_t*, typename Node::device_type> rowptr_view,
149 const Kokkos::View<LocalOrdinal*, typename Node::device_type> colind_LID_view,
150 const Kokkos::View<GlobalOrdinal*, typename Node::device_type> colind_GID_view,
152 const Kokkos::View<const int*, typename Node::device_type> owningPIDs_view,
153 Teuchos::Array<int>& remotePIDs,
155 const Teuchos::RCP<Teuchos::ParameterList>& params = Teuchos::null);
170template <
typename LocalOrdinal,
typename GlobalOrdinal,
typename Node>
172 bool useReverseModeForOwnership,
173 const ::Tpetra::Details::Transfer<LocalOrdinal, GlobalOrdinal, Node>& transferForMigratingData,
174 bool useReverseModeForMigration,
185namespace Import_Util {
187template <
typename PID,
typename GlobalOrdinal>
188bool sort_PID_then_GID(
const std::pair<PID, GlobalOrdinal>& a,
189 const std::pair<PID, GlobalOrdinal>& b) {
190 if (a.first != b.first)
191 return (a.first < b.first);
192 return (a.second < b.second);
195template <
typename PID,
196 typename GlobalOrdinal,
197 typename LocalOrdinal>
198bool sort_PID_then_pair_GID_LID(
const std::pair<PID, std::pair<GlobalOrdinal, LocalOrdinal>>& a,
199 const std::pair<PID, std::pair<GlobalOrdinal, LocalOrdinal>>& b) {
200 if (a.first != b.first)
201 return a.first < b.first;
203 return (a.second.first < b.second.first);
206template <
typename Scalar,
207 typename LocalOrdinal,
208 typename GlobalOrdinal,
210void reverseNeighborDiscovery(
const CrsMatrix<Scalar, LocalOrdinal, GlobalOrdinal, Node>& SourceMatrix,
211 const typename CrsMatrix<Scalar, LocalOrdinal, GlobalOrdinal, Node>::row_ptrs_host_view_type& rowptr,
212 const typename CrsMatrix<Scalar, LocalOrdinal, GlobalOrdinal, Node>::local_inds_host_view_type& colind,
216 Teuchos::ArrayRCP<int>& type3PIDs,
217 Teuchos::ArrayRCP<LocalOrdinal>& type3LIDs,
218 Teuchos::RCP<
const Teuchos::Comm<int>>& rcomm) {
219#ifdef HAVE_TPETRACORE_MPI
220 using ::Tpetra::Details::Behavior;
221 typedef LocalOrdinal LO;
222 typedef GlobalOrdinal GO;
223 typedef std::pair<GO, GO> pidgidpair_t;
225 const std::string prefix{
" Import_Util2::ReverseND:: "};
226 const std::string label(
"IU2::Neighbor");
229 if (MyImporter.is_null())
return;
231 std::ostringstream errstr;
233 auto const comm = MyDomainMap->getComm();
235 MPI_Comm rawComm = getRawMpiComm(*comm);
236 const int MyPID = rcomm->getRank();
244 Distributor& Distor = MyImporter->getDistributor();
245 const size_t NumRecvs = Distor.getNumReceives();
246 const size_t NumSends = Distor.getNumSends();
247 auto RemoteLIDs = MyImporter->getRemoteLIDs();
248 auto const ProcsFrom = Distor.getProcsFrom();
249 auto const ProcsTo = Distor.getProcsTo();
251 auto LengthsFrom = Distor.getLengthsFrom();
252 auto MyColMap = SourceMatrix.getColMap();
253 const size_t numCols = MyColMap->getLocalNumElements();
254 RCP<const Tpetra::Map<LocalOrdinal, GlobalOrdinal, Node>> target = MyImporter->getTargetMap();
258 Teuchos::Array<int> RemotePIDOrder(numCols, -1);
261 for (
size_t i = 0, j = 0; i < NumRecvs; ++i) {
262 for (
size_t k = 0; k < LengthsFrom[i]; ++k) {
263 const int pid = ProcsFrom[i];
265 RemotePIDOrder[RemoteLIDs[j]] = i;
277 Teuchos::Array<int> ReverseSendSizes(NumRecvs, 0);
279 Teuchos::Array<Teuchos::ArrayRCP<pidgidpair_t>> RSB(NumRecvs);
294 Teuchos::Array<std::set<pidgidpair_t>> pidsets(NumRecvs);
297 for (
size_t i = 0; i < NumExportLIDs; i++) {
298 LO lid = ExportLIDs[i];
299 GO exp_pid = ExportPIDs[i];
300 for (
auto j = rowptr[lid]; j < rowptr[lid + 1]; j++) {
301 int pid_order = RemotePIDOrder[colind[j]];
302 if (pid_order != -1) {
303 GO gid = MyColMap->getGlobalElement(colind[j]);
304 auto tpair = pidgidpair_t(exp_pid, gid);
305 pidsets[pid_order].insert(pidsets[pid_order].end(), tpair);
314 for (
auto&& ps : pidsets) {
316 RSB[jj] = Teuchos::arcp(
new pidgidpair_t[s], 0, s,
true);
317 std::copy(ps.begin(), ps.end(), RSB[jj]);
318 ReverseSendSizes[jj] = s;
324 Teuchos::Array<int> ReverseRecvSizes(NumSends, -1);
325 Teuchos::Array<MPI_Request> rawBreq(ProcsFrom.size() + ProcsTo.size(), MPI_REQUEST_NULL);
327 const int mpi_tag_base_ = 3;
330 for (
int i = 0; i < ProcsTo.size(); ++i) {
331 int Rec_Tag = mpi_tag_base_ + ProcsTo[i];
332 int* thisrecv = (
int*)(&ReverseRecvSizes[i]);
333 MPI_Request rawRequest = MPI_REQUEST_NULL;
334 MPI_Irecv(
const_cast<int*
>(thisrecv),
341 rawBreq[mpireq_idx++] = rawRequest;
343 for (
int i = 0; i < ProcsFrom.size(); ++i) {
344 int Send_Tag = mpi_tag_base_ + MyPID;
345 int* mysend = (
int*)(&ReverseSendSizes[i]);
346 MPI_Request rawRequest = MPI_REQUEST_NULL;
354 rawBreq[mpireq_idx++] = rawRequest;
356 Teuchos::Array<MPI_Status> rawBstatus(rawBreq.size());
357#ifdef HAVE_TPETRA_DEBUG
360 MPI_Waitall(rawBreq.size(), rawBreq.getRawPtr(),
361 rawBstatus.getRawPtr());
363#ifdef HAVE_TPETRA_DEBUG
365 errstr << MyPID <<
"sE1 reverseNeighborDiscovery Mpi_Waitall error on send ";
367 std::cerr << errstr.str() << std::flush;
371 int totalexportpairrecsize = 0;
372 for (
size_t i = 0; i < NumSends; ++i) {
373 totalexportpairrecsize += ReverseRecvSizes[i];
374#ifdef HAVE_TPETRA_DEBUG
375 if (ReverseRecvSizes[i] < 0) {
376 errstr << MyPID <<
"E4 reverseNeighborDiscovery: got < 0 for receive size " << ReverseRecvSizes[i] << std::endl;
381 Teuchos::ArrayRCP<pidgidpair_t> AllReverseRecv = Teuchos::arcp(
new pidgidpair_t[totalexportpairrecsize], 0, totalexportpairrecsize,
true);
384 for (
int i = 0; i < ProcsTo.size(); ++i) {
385 int recv_data_size = ReverseRecvSizes[i] * 2;
386 int recvData_MPI_Tag = mpi_tag_base_ * 2 + ProcsTo[i];
387 MPI_Request rawRequest = MPI_REQUEST_NULL;
388 GO* rec_bptr = (GO*)(&AllReverseRecv[offset]);
389 offset += ReverseRecvSizes[i];
392 ::Tpetra::Details::MpiTypeTraits<GO>::getType(rec_bptr[0]),
397 rawBreq[mpireq_idx++] = rawRequest;
399 for (
int ii = 0; ii < ProcsFrom.size(); ++ii) {
400 GO* send_bptr = (GO*)(RSB[ii].getRawPtr());
401 MPI_Request rawSequest = MPI_REQUEST_NULL;
402 int send_data_size = ReverseSendSizes[ii] * 2;
403 int sendData_MPI_Tag = mpi_tag_base_ * 2 + MyPID;
406 ::Tpetra::Details::MpiTypeTraits<GO>::getType(send_bptr[0]),
412 rawBreq[mpireq_idx++] = rawSequest;
414#ifdef HAVE_TPETRA_DEBUG
417 MPI_Waitall(rawBreq.size(),
419 rawBstatus.getRawPtr());
420#ifdef HAVE_TPETRA_DEBUG
422 errstr << MyPID <<
"E3.r reverseNeighborDiscovery Mpi_Waitall error on receive ";
424 std::cerr << errstr.str() << std::flush;
427 std::sort(AllReverseRecv.begin(), AllReverseRecv.end(), Tpetra::Import_Util::sort_PID_then_GID<GlobalOrdinal, GlobalOrdinal>);
429 auto newEndOfPairs = std::unique(AllReverseRecv.begin(), AllReverseRecv.end());
431 if (AllReverseRecv.begin() == newEndOfPairs)
return;
432 int ARRsize = std::distance(AllReverseRecv.begin(), newEndOfPairs);
433 auto rPIDs = Teuchos::arcp(
new int[ARRsize], 0, ARRsize,
true);
434 auto rLIDs = Teuchos::arcp(
new LocalOrdinal[ARRsize], 0, ARRsize,
true);
437 for (
auto itr = AllReverseRecv.begin(); itr != newEndOfPairs; ++itr) {
438 if ((
int)(itr->first) != MyPID) {
439 rPIDs[tsize] = (int)itr->first;
440 LocalOrdinal lid = MyDomainMap->getLocalElement(itr->second);
446 type3PIDs = rPIDs.persistingView(0, tsize);
447 type3LIDs = rLIDs.persistingView(0, tsize);
450 std::cerr << errstr.str() << std::flush;
454 MPI_Abort(MPI_COMM_WORLD, -1);
460template <
typename Scalar,
typename Ordinal>
462 const Teuchos::ArrayView<Ordinal>&
CRS_colind,
463 const Teuchos::ArrayView<Scalar>&
CRS_vals,
464 const ::KokkosSparse::SortAlgorithm
option) {
467 auto vals_k = Kokkos::View<Scalar*, Kokkos::HostSpace, Kokkos::MemoryUnmanaged>(
CRS_vals.data(),
CRS_vals.size());
471template <
typename Ordinal>
472void sortCrsEntries(
const Teuchos::ArrayView<size_t>&
CRS_rowptr,
473 const Teuchos::ArrayView<Ordinal>&
CRS_colind,
474 const ::KokkosSparse::SortAlgorithm
option) {
480template <
typename rowptr_array_type,
typename colind_array_type,
typename vals_array_type>
481void sortCrsEntries(
const rowptr_array_type& CRS_rowptr,
482 const colind_array_type& CRS_colind,
483 const vals_array_type& CRS_vals,
484 const ::KokkosSparse::SortAlgorithm option) {
485 KokkosSparse::sort_crs_matrix(CRS_rowptr, CRS_colind, CRS_vals,
486 KokkosKernels::ArithTraits<typename colind_array_type::non_const_value_type>::max(),
490template <
typename rowptr_array_type,
typename colind_array_type>
492 const colind_array_type& CRS_colind,
493 const ::KokkosSparse::SortAlgorithm option) {
494 KokkosSparse::sort_crs_graph(CRS_rowptr, CRS_colind,
495 KokkosKernels::ArithTraits<typename colind_array_type::non_const_value_type>::max(),
500template <
typename Scalar,
typename Ordinal>
502 const Teuchos::ArrayView<Ordinal>&
CRS_colind,
503 const Teuchos::ArrayView<Scalar>&
CRS_vals) {
571template <
typename Ordinal>
572void sortAndMergeCrsEntries(
const Teuchos::ArrayView<size_t>&
CRS_rowptr,
573 const Teuchos::ArrayView<Ordinal>&
CRS_colind) {
574 Teuchos::ArrayView<Tpetra::Details::DefaultTypes::scalar_type>
CRS_vals;
578template <
class rowptr_view_type,
class colind_view_type,
class vals_view_type>
579void sortAndMergeCrsEntries(rowptr_view_type& CRS_rowptr,
580 colind_view_type& CRS_colind,
581 vals_view_type& CRS_vals,
582 const ::KokkosSparse::SortAlgorithm option) {
583 using execution_space =
typename vals_view_type::execution_space;
585 auto CRS_rowptr_in = CRS_rowptr;
586 auto CRS_colind_in = CRS_colind;
587 auto CRS_vals_in = CRS_vals;
589 KokkosSparse::sort_and_merge_matrix<execution_space, rowptr_view_type,
590 colind_view_type, vals_view_type>(CRS_rowptr_in, CRS_colind_in, CRS_vals_in,
591 CRS_rowptr, CRS_colind, CRS_vals,
592 KokkosKernels::ArithTraits<typename colind_view_type::non_const_value_type>::max(),
596template <
typename LocalOrdinal,
typename GlobalOrdinal,
typename Node>
597void lowCommunicationMakeColMapAndReindexSerial(
const Teuchos::ArrayView<const size_t>& rowptr,
598 const Teuchos::ArrayView<LocalOrdinal>& colind_LID,
599 const Teuchos::ArrayView<GlobalOrdinal>& colind_GID,
601 const Teuchos::ArrayView<const int>& owningPIDs,
602 Teuchos::Array<int>& remotePIDs,
604 const Teuchos::RCP<Teuchos::ParameterList>& params = Teuchos::null) {
606 typedef LocalOrdinal LO;
607 typedef GlobalOrdinal GO;
610 const char prefix[] =
"lowCommunicationMakeColMapAndReindexSerial: ";
614 const map_type& domainMap = *domainMapRCP;
619 const size_t numDomainElements = domainMap.getLocalNumElements();
620 Teuchos::Array<bool> LocalGIDs;
621 if (numDomainElements > 0) {
622 LocalGIDs.resize(numDomainElements,
false);
633 const size_t numMyRows = rowptr.size() - 1;
634 const int hashsize = std::max(
static_cast<int>(numMyRows), 100);
637 Teuchos::Array<GO> RemoteGIDList;
638 RemoteGIDList.reserve(hashsize);
639 Teuchos::Array<int> PIDList;
640 PIDList.reserve(hashsize);
651 size_t NumLocalColGIDs = 0;
652 LO NumRemoteColGIDs = 0;
653 for (
size_t i = 0; i < numMyRows; ++i) {
654 for (
size_t j = rowptr[i]; j < rowptr[i + 1]; ++j) {
655 const GO GID = colind_GID[j];
657 const LO LID = domainMap.getLocalElement(GID);
659 const bool alreadyFound = LocalGIDs[LID];
661 LocalGIDs[LID] =
true;
666 const LO hash_value = RemoteGIDs.get(GID);
667 if (hash_value == -1) {
668 const int PID = owningPIDs[j];
669 TEUCHOS_TEST_FOR_EXCEPTION(
670 PID == -1, std::invalid_argument, prefix <<
"Cannot figure out if "
672 colind_LID[j] =
static_cast<LO
>(numDomainElements + NumRemoteColGIDs);
673 RemoteGIDs.add(GID, NumRemoteColGIDs);
674 RemoteGIDList.push_back(GID);
675 PIDList.push_back(PID);
678 colind_LID[j] =
static_cast<LO
>(numDomainElements + hash_value);
686 if (domainMap.getComm()->getSize() == 1) {
689 TEUCHOS_TEST_FOR_EXCEPTION(
690 NumRemoteColGIDs != 0, std::runtime_error, prefix <<
"There is only one "
691 "process in the domain Map's communicator, which means that there are no "
692 "\"remote\" indices. Nevertheless, some column indices are not in the "
694 if (
static_cast<size_t>(NumLocalColGIDs) == numDomainElements) {
698 colMap = domainMapRCP;
704 const LO numMyCols = NumLocalColGIDs + NumRemoteColGIDs;
705 GST numMyColsGST =
static_cast<GST
>(numMyCols);
707 auto req = Details::iallreduce(numMyColsGST, numGlobalCols, Teuchos::REDUCE_SUM, *domainMap.getComm());
711 Teuchos::Array<GO> ColIndices;
712 GO* RemoteColIndices = NULL;
714 ColIndices.resize(numMyCols);
715 if (NumLocalColGIDs !=
static_cast<size_t>(numMyCols)) {
716 RemoteColIndices = &ColIndices[NumLocalColGIDs];
720 for (LO i = 0; i < NumRemoteColGIDs; ++i) {
721 RemoteColIndices[i] = RemoteGIDList[i];
725 Teuchos::Array<LO> RemotePermuteIDs(NumRemoteColGIDs);
726 for (LO i = 0; i < NumRemoteColGIDs; ++i) {
727 RemotePermuteIDs[i] = i;
734 ColIndices.begin() + NumLocalColGIDs,
735 RemotePermuteIDs.begin());
741 remotePIDs = PIDList;
750 LO StartCurrent = 0, StartNext = 1;
751 while (StartNext < NumRemoteColGIDs) {
752 if (PIDList[StartNext] == PIDList[StartNext - 1]) {
755 Tpetra::sort2(ColIndices.begin() + NumLocalColGIDs + StartCurrent,
756 ColIndices.begin() + NumLocalColGIDs + StartNext,
757 RemotePermuteIDs.begin() + StartCurrent);
758 StartCurrent = StartNext;
762 Tpetra::sort2(ColIndices.begin() + NumLocalColGIDs + StartCurrent,
763 ColIndices.begin() + NumLocalColGIDs + StartNext,
764 RemotePermuteIDs.begin() + StartCurrent);
767 Teuchos::Array<LO> ReverseRemotePermuteIDs(NumRemoteColGIDs);
768 for (LO i = 0; i < NumRemoteColGIDs; ++i) {
769 ReverseRemotePermuteIDs[RemotePermuteIDs[i]] = i;
773 bool use_local_permute =
false;
774 Teuchos::Array<LO> LocalPermuteIDs(numDomainElements);
786 Teuchos::ArrayView<const GO> domainGlobalElements = domainMap.getLocalElementList();
787 if (
static_cast<size_t>(NumLocalColGIDs) == numDomainElements) {
788 if (NumLocalColGIDs > 0) {
790 std::copy(domainGlobalElements.begin(), domainGlobalElements.end(),
794 LO NumLocalAgain = 0;
795 use_local_permute =
true;
796 for (
size_t i = 0; i < numDomainElements; ++i) {
798 LocalPermuteIDs[i] = NumLocalAgain;
799 ColIndices[NumLocalAgain++] = domainGlobalElements[i];
802 TEUCHOS_TEST_FOR_EXCEPTION(
803 static_cast<size_t>(NumLocalAgain) != NumLocalColGIDs,
804 std::runtime_error, prefix <<
"Local ID count test failed.");
809 colMap = rcp(
new map_type(numGlobalCols, ColIndices, domainMap.getIndexBase(),
814 for (
size_t i = 0; i < numMyRows; ++i) {
815 for (
size_t j = rowptr[i]; j < rowptr[i + 1]; ++j) {
816 const LO ID = colind_LID[j];
817 if (
static_cast<size_t>(ID) < numDomainElements) {
818 if (use_local_permute) {
819 colind_LID[j] = LocalPermuteIDs[colind_LID[j]];
825 colind_LID[j] = NumLocalColGIDs + ReverseRemotePermuteIDs[colind_LID[j] - numDomainElements];
831template <
typename LocalOrdinal,
typename GlobalOrdinal,
typename Node>
833 const Teuchos::ArrayView<const size_t>&
rowptr,
834 const Teuchos::ArrayView<LocalOrdinal>&
colind_LID,
835 const Teuchos::ArrayView<GlobalOrdinal>&
colind_GID,
837 const Teuchos::ArrayView<const int>&
owningPIDs,
838 Teuchos::Array<int>& remotePIDs,
840 const Teuchos::RCP<Teuchos::ParameterList>&
params) {
841 using DT =
typename Node::device_type;
842 using execution_space =
typename DT::execution_space;
843 execution_space
exec;
862template <
typename LocalOrdinal,
typename GlobalOrdinal,
typename Node>
864 const Kokkos::View<const size_t*, typename Node::device_type>
rowptr_view,
865 const Kokkos::View<LocalOrdinal*, typename Node::device_type>
colind_LID_view,
866 const Kokkos::View<GlobalOrdinal*, typename Node::device_type>
colind_GID_view,
868 const Kokkos::View<const int*, typename Node::device_type>
owningPIDs_view,
869 Teuchos::Array<int>& remotePIDs,
871 const Teuchos::RCP<Teuchos::ParameterList>&
params) {
877 const char prefix[] =
"lowCommunicationMakeColMapAndReindex: ";
880 typedef typename Node::device_type DT;
881 using execution_space =
typename DT::execution_space;
882 using memory_space =
typename DT::memory_space;
883 execution_space
exec;
884 using team_policy = Kokkos::TeamPolicy<execution_space, Kokkos::Schedule<Kokkos::Dynamic>>;
885 typedef typename map_type::local_map_type local_map_type;
905 const LO
LINVALID = Teuchos::OrdinalTraits<LO>::invalid();
912 Kokkos::parallel_reduce(
914 const int i =
member.league_rank();
918 Kokkos::parallel_reduce(
927 LocalGIDs_view[LID] = true;
928 innerUpdate.numLocalColGIDs++;
934 innerUpdate.numRemoteColGIDs++;
936 Kokkos::abort(
"Cannot figure out if ID is owned.\n");
957 if (domainMap.getComm()->getSize() == 1) {
962 "process in the domain Map's communicator, which means that there are no "
963 "\"remote\" indices. Nevertheless, some column indices are not in the "
972 auto localColMap = colMap->getLocalMap();
973 Kokkos::parallel_for(
981 Kokkos::View<GO*, DT> RemoteColMapIndices_unsorted(Kokkos::ViewAllocateWithoutInitializing(
"RemoteColMapIndices_unsorted"), NumRemoteColGIDs);
982 Kokkos::View<int*, DT> RemotePIDs_unsorted(Kokkos::ViewAllocateWithoutInitializing(
"RemotePIDs_unsorted"), NumRemoteColGIDs);
989 size_t numEnteredRemotes;
990 Kokkos::parallel_scan(
991 Kokkos::RangePolicy<execution_space>(0, GIDs_map.capacity()), KOKKOS_LAMBDA(
const int i,
size_t& update,
const bool final) {
992 if (GIDs_map.valid_at(i) && GIDs_map.value_at(i) != -1) {
994 RemoteColMapIndices_unsorted(update) = GIDs_map.key_at(i);
995 RemotePIDs_unsorted(update) = GIDs_map.value_at(i);
1001 TEUCHOS_ASSERT(numEnteredRemotes == NumRemoteColGIDs);
1005 const size_t numMyCols = NumLocalColGIDs + NumRemoteColGIDs;
1006 GST numMyColsGST =
static_cast<GST
>(numMyCols);
1008 auto req = Details::iallreduce(numMyColsGST, numGlobalCols, Teuchos::REDUCE_SUM, *domainMap.getComm());
1012 Kokkos::View<GO*, DT> ColMapIndices(Kokkos::ViewAllocateWithoutInitializing(
"ColMapIndices"), numMyCols);
1015 if (NumRemoteColGIDs > 0) {
1017 auto RemoteColMapIndices_sorted = Kokkos::subview(ColMapIndices, Kokkos::make_pair(NumLocalColGIDs, numMyCols));
1020 Kokkos::View<size_t*, memory_space> index(Kokkos::ViewAllocateWithoutInitializing(
"index"), NumRemoteColGIDs);
1021 Kokkos::parallel_for(
1022 Kokkos::RangePolicy<execution_space>(0, NumRemoteColGIDs), KOKKOS_LAMBDA(
const size_t i) {
1026 exec, index, KOKKOS_LAMBDA(
const size_t i,
const size_t j) {
1027 auto pid_i = RemotePIDs_unsorted(i);
1028 auto pid_j = RemotePIDs_unsorted(j);
1030 return RemoteColMapIndices_unsorted(i) < RemoteColMapIndices_unsorted(j);
1032 return pid_i < pid_j;
1035 Kokkos::View<int*, memory_space> RemotePIDs_sorted(Kokkos::ViewAllocateWithoutInitializing(
"RemotePIDs_new"), NumRemoteColGIDs);
1036 Kokkos::parallel_for(
1037 Kokkos::RangePolicy<execution_space>(0, NumRemoteColGIDs), KOKKOS_LAMBDA(
const size_t i) {
1038 RemoteColMapIndices_sorted(i) = RemoteColMapIndices_unsorted(index(i));
1039 RemotePIDs_sorted(i) = RemotePIDs_unsorted(index(i));
1044 Teuchos::Array<int> PIDList(NumRemoteColGIDs);
1045 Kokkos::View<int*, Kokkos::HostSpace> RemotePIDs_sorted_host(PIDList.data(), NumRemoteColGIDs);
1046 Kokkos::deep_copy(exec, RemotePIDs_sorted_host, RemotePIDs_sorted);
1049 remotePIDs = PIDList;
1064 if (
static_cast<size_t>(NumLocalColGIDs) == numDomainElements) {
1065 if (NumLocalColGIDs > 0) {
1067 auto LocalColMapIndices = Kokkos::subview(ColMapIndices, Kokkos::make_pair((
size_t)0, numDomainElements));
1068 Kokkos::deep_copy(LocalColMapIndices, domainMap.getMyGlobalIndicesDevice());
1072 LO NumLocalAgain = 0;
1073 Kokkos::parallel_scan(
1074 Kokkos::RangePolicy<execution_space>(0, numDomainElements), KOKKOS_LAMBDA(
const int i, LO& update,
const bool final) {
1075 if (LocalGIDs_view(i)) {
1077 ColMapIndices(update) = domainMap_local.getGlobalElement(i);
1084 TEUCHOS_TEST_FOR_EXCEPTION(
1085 static_cast<size_t>(NumLocalAgain) != NumLocalColGIDs,
1086 std::runtime_error, prefix <<
"Local ID count test failed.");
1091 colMap = rcp(
new map_type(numGlobalCols, ColMapIndices, domainMap.getIndexBase(),
1092 domainMap.getComm(), params));
1095 auto localColMap = colMap->getLocalMap();
1096 Kokkos::parallel_for(
1097 Kokkos::RangePolicy<execution_space>(0, colind_GID_view.size()), KOKKOS_LAMBDA(
const int i) {
1098 colind_LID_view(i) = localColMap.getLocalElement(colind_GID_view(i));
1115template <
typename LocalOrdinal,
typename GlobalOrdinal,
typename Node>
1131#ifdef HAVE_TPETRA_DEBUG
1142 Teuchos::ArrayRCP<int> pids =
temp.getDataNonConst();
1143 Teuchos::ArrayView<int>
v_pids = pids();
1145 TEUCHOS_TEST_FOR_EXCEPTION(1, std::runtime_error,
"Tpetra::Import_Util::getTwoTransferOwnershipVector owner must be 1-to-1");
1149 TEUCHOS_TEST_FOR_EXCEPTION(1, std::runtime_error,
"Tpetra::Import_Util::getTwoTransferOwnershipVector this option not yet implemented");
1151 TEUCHOS_TEST_FOR_EXCEPTION(1, std::runtime_error,
"Tpetra::Import_Util::getTwoTransferOwnershipVector owner must be 1-to-1");
Declaration of the Tpetra::CrsMatrix class.
Add specializations of Teuchos::Details::MpiTypeTraits for Kokkos::complex<float> and Kokkos::complex...
Declaration of Tpetra::Details::Profiling, a scope guard for Kokkos Profiling.
Functions that wrap Kokkos::create_mirror_view, in order to avoid deep copies when not necessary,...
void sortCrsEntries(const Teuchos::ArrayView< size_t > &CRS_rowptr, const Teuchos::ArrayView< Ordinal > &CRS_colind, const Teuchos::ArrayView< Scalar > &CRS_vals, const ::KokkosSparse::SortAlgorithm option=::KokkosSparse::SortAlgorithm::DEFAULT)
Sort the entries of the (raw CSR) matrix by column index within each row.
void getTwoTransferOwnershipVector(const ::Tpetra::Details::Transfer< LocalOrdinal, GlobalOrdinal, Node > &transferThatDefinesOwnership, bool useReverseModeForOwnership, const ::Tpetra::Details::Transfer< LocalOrdinal, GlobalOrdinal, Node > &transferForMigratingData, bool useReverseModeForMigration, Tpetra::Vector< int, LocalOrdinal, GlobalOrdinal, Node > &owningPIDs)
Generates an list of owning PIDs based on two transfer (aka import/export objects) Let: OwningMap = u...
void sortAndMergeCrsEntries(const Teuchos::ArrayView< size_t > &CRS_rowptr, const Teuchos::ArrayView< Ordinal > &CRS_colind, const Teuchos::ArrayView< Scalar > &CRS_vals)
Sort and merge the entries of the (raw CSR) matrix by column index within each row.
void lowCommunicationMakeColMapAndReindex(const Teuchos::ArrayView< const size_t > &rowptr, const Teuchos::ArrayView< LocalOrdinal > &colind_LID, const Teuchos::ArrayView< GlobalOrdinal > &colind_GID, const Teuchos::RCP< const Tpetra::Map< LocalOrdinal, GlobalOrdinal, Node > > &domainMapRCP, const Teuchos::ArrayView< const int > &owningPIDs, Teuchos::Array< int > &remotePIDs, Teuchos::RCP< const Tpetra::Map< LocalOrdinal, GlobalOrdinal, Node > > &colMap, const Teuchos::RCP< Teuchos::ParameterList > ¶ms=Teuchos::null)
lowCommunicationMakeColMapAndReindex
void getPids(const Tpetra::Import< LocalOrdinal, GlobalOrdinal, Node > &Importer, Teuchos::Array< int > &pids, bool use_minus_one_for_local)
Like getPidGidPairs, but just gets the PIDs, ordered by the column Map.
Stand-alone utility functions and macros.
Struct that holds views of the contents of a CrsMatrix.
Common base class of Import and Export.
Teuchos::ArrayView< const LO > getExportLIDs() const
List of entries in the source Map that will be sent to other processes.
size_t getNumExportIDs() const
Number of entries that must be sent by the calling process to other processes.
Teuchos::ArrayView< const int > getExportPIDs() const
List of processes to which entries will be sent.
Impl::CreateMirrorViewFromUnmanagedHostArray< ValueType, OutputDeviceType >::output_view_type create_mirror_view_from_raw_host_array(const OutputDeviceType &, ValueType *inPtr, const size_t inSize, const bool copy=true, const char label[]="")
Variant of Kokkos::create_mirror_view that takes a raw host 1-d array as input.
Namespace Tpetra contains the class and methods constituting the Tpetra library.
void sort2(const IT1 &first1, const IT1 &last1, const IT2 &first2, const bool stableSort=false)
Sort the first array, and apply the resulting permutation to the second array.
void sort3(const IT1 &first1, const IT1 &last1, const IT2 &first2, const IT3 &first3, const bool stableSort=false)
Sort the first array, and apply the same permutation to the second and third arrays.
@ REPLACE
Replace existing values with new values.