10#ifndef TPETRA_DETAILS_UNPACKCRSMATRIXANDCOMBINE_DEF_HPP
11#define TPETRA_DETAILS_UNPACKCRSMATRIXANDCOMBINE_DEF_HPP
15#include "TpetraCore_config.h"
16#include "Kokkos_Core.hpp"
17#include "Teuchos_Array.hpp"
18#include "Teuchos_ArrayView.hpp"
19#include "Teuchos_OrdinalTraits.hpp"
20#include "Teuchos_TimeMonitor.hpp"
28#include "Tpetra_Details_DefaultTypes.hpp"
59namespace UnpackAndCombineCrsMatrixImpl {
70template <
class ST,
class LO,
class GO>
77 const size_t num_bytes,
79 const size_t bytes_per_value) {
84 bool unpack_pids = pids_out.size() > 0;
86 const size_t num_ent_beg = offset;
89 const size_t gids_beg = num_ent_beg + num_ent_len;
90 const size_t gids_len =
93 const size_t pids_beg = gids_beg + gids_len;
96 const size_t vals_beg = gids_beg + gids_len + pids_len;
97 const size_t vals_len = num_ent * bytes_per_value;
99 const size_t expected_num_bytes = num_ent_len + gids_len + pids_len + vals_len;
100 if (expected_num_bytes > num_bytes) {
104 const char*
const num_ent_in = imports + num_ent_beg;
105 const char*
const gids_in = imports + gids_beg;
106 const char*
const pids_in = unpack_pids ? imports + pids_beg :
nullptr;
107 const char*
const vals_in = imports + vals_beg;
109 size_t num_bytes_out = 0;
112 if (
static_cast<size_t>(num_ent_out) != num_ent) {
117 Kokkos::pair<int, size_t> p;
122 num_bytes_out += p.second;
129 num_bytes_out += p.second;
136 num_bytes_out += p.second;
139 if (num_bytes_out != expected_num_bytes) {
155template <
class LocalMatrix,
class LocalMap,
class BufferDeviceType>
156struct UnpackCrsMatrixAndCombineFunctor {
157 typedef LocalMatrix local_matrix_type;
160 typedef typename local_matrix_type::value_type ST;
164 typedef typename DT::execution_space XS;
166 typedef Kokkos::View<const size_t*, BufferDeviceType>
167 num_packets_per_lid_type;
168 typedef Kokkos::View<const size_t*, DT> offsets_type;
169 typedef Kokkos::View<const char*, BufferDeviceType> input_buffer_type;
170 typedef Kokkos::View<const LO*, BufferDeviceType> import_lids_type;
172 typedef Kokkos::View<int, DT> error_type;
173 using member_type =
typename Kokkos::TeamPolicy<XS>::member_type;
175 static_assert(std::is_same<LO, typename local_matrix_type::ordinal_type>::value,
176 "LocalMap::local_ordinal_type and "
177 "LocalMatrix::ordinal_type must be the same.");
179 local_matrix_type local_matrix;
180 local_map_type local_col_map;
181 input_buffer_type imports;
182 num_packets_per_lid_type num_packets_per_lid;
183 import_lids_type import_lids;
184 Kokkos::View<const LO* [2], DT> batch_info;
185 offsets_type offsets;
188 size_t bytes_per_value;
190 error_type error_code;
192 UnpackCrsMatrixAndCombineFunctor(
193 const local_matrix_type& local_matrix_in,
194 const local_map_type& local_col_map_in,
195 const input_buffer_type& imports_in,
196 const num_packets_per_lid_type& num_packets_per_lid_in,
197 const import_lids_type& import_lids_in,
198 const Kokkos::View<
const LO* [2], DT>& batch_info_in,
199 const offsets_type& offsets_in,
201 const size_t batch_size_in,
202 const size_t bytes_per_value_in,
203 const bool atomic_in)
204 : local_matrix(local_matrix_in)
205 , local_col_map(local_col_map_in)
206 , imports(imports_in)
207 , num_packets_per_lid(num_packets_per_lid_in)
208 , import_lids(import_lids_in)
209 , batch_info(batch_info_in)
210 , offsets(offsets_in)
211 , combine_mode(combine_mode_in)
212 , batch_size(batch_size_in)
213 , bytes_per_value(bytes_per_value_in)
215 , error_code(
"error") {}
217 KOKKOS_INLINE_FUNCTION
218 void operator()(member_type team_member)
const {
219 using Kokkos::MemoryUnmanaged;
220 using Kokkos::subview;
223 const LO batch = team_member.league_rank();
224 const LO lid_no = batch_info(batch, 0);
225 const LO batch_no = batch_info(batch, 1);
227 const size_t num_bytes = num_packets_per_lid(lid_no);
234 const LO import_lid = import_lids(lid_no);
235 const size_t buf_size = imports.size();
236 const size_t offset = offsets(lid_no);
240 const char*
const in_buf = imports.data() + offset;
242 const size_t num_entries_in_row =
static_cast<size_t>(num_ent_LO);
245 size_t expected_num_bytes = 0;
252 if (expected_num_bytes > num_bytes) {
254 "*** Error: UnpackCrsMatrixAndCombineFunctor: "
255 "At row %d, the expected number of bytes (%d) != number of unpacked bytes (%d)\n",
256 (
int)lid_no, (
int)expected_num_bytes, (
int)num_bytes);
258 Kokkos::atomic_compare_exchange(error_code.data(), 0, 21);
262 if (offset > buf_size || offset + num_bytes > buf_size) {
264 "*** Error: UnpackCrsMatrixAndCombineFunctor: "
265 "At row %d, the offset (%d) > buffer size (%d)\n",
266 (
int)lid_no, (
int)offset, (
int)buf_size);
268 Kokkos::atomic_compare_exchange(error_code.data(), 0, 22);
273 size_t num_entries_in_batch = 0;
274 if (num_entries_in_row <= batch_size)
275 num_entries_in_batch = num_entries_in_row;
276 else if (num_entries_in_row >= (batch_no + 1) * batch_size)
277 num_entries_in_batch = batch_size;
279 num_entries_in_batch = num_entries_in_row - batch_no * batch_size;
282 const size_t num_ent_start = offset;
283 const size_t num_ent_end = num_ent_start + bytes_per_lid;
286 const size_t gids_start = num_ent_end;
287 const size_t gids_end = gids_start + num_entries_in_row * bytes_per_gid;
289 const size_t vals_start = gids_end;
291 const size_t shift = batch_no * batch_size;
292 const char*
const num_ent_in = imports.data() + num_ent_start;
293 const char*
const gids_in = imports.data() + gids_start + shift * bytes_per_gid;
294 const char*
const vals_in = imports.data() + vals_start + shift * bytes_per_value;
298 if (
static_cast<size_t>(num_ent_out) != num_entries_in_row) {
300 "*** Error: UnpackCrsMatrixAndCombineFunctor: "
301 "At row %d, number of entries (%d) != number of entries unpacked (%d)\n",
302 (
int)lid_no, (
int)num_entries_in_row, (
int)num_ent_out);
304 Kokkos::atomic_compare_exchange(error_code.data(), 0, 23);
307 constexpr bool matrix_has_sorted_rows =
true;
310 Kokkos::parallel_for(
311 Kokkos::TeamThreadRange(team_member, num_entries_in_batch),
312 [=, *
this](
const LO& j) {
316 distance = j * bytes_per_gid;
318 auto lid_out = local_col_map.getLocalElement(gid_out);
326 distance = j * bytes_per_value;
329 if (combine_mode ==
ADD) {
333 const bool use_atomic_updates = atomic;
334 (void)local_matrix.sumIntoValues(
339 matrix_has_sorted_rows,
341 }
else if (combine_mode ==
REPLACE) {
345 const bool use_atomic_updates =
false;
346 (void)local_matrix.replaceValues(
351 matrix_has_sorted_rows,
356 "*** Error: UnpackCrsMatrixAndCombineFunctor: "
357 "At row %d, an unknown error occurred during unpack\n",
359 Kokkos::atomic_compare_exchange(error_code.data(), 0, 31);
363 team_member.team_barrier();
368 auto error_code_h = Kokkos::create_mirror_view_and_copy(
369 Kokkos::HostSpace(), error_code);
370 return error_code_h();
375struct MaxNumEntTag {};
376struct TotNumEntTag {};
386template <
class LO,
class DT,
class BDT>
387class NumEntriesFunctor {
389 typedef Kokkos::View<const size_t*, BDT> num_packets_per_lid_type;
390 typedef Kokkos::View<const size_t*, DT> offsets_type;
391 typedef Kokkos::View<const char*, BDT> input_buffer_type;
394 typedef size_t value_type;
397 num_packets_per_lid_type num_packets_per_lid;
398 offsets_type offsets;
399 input_buffer_type imports;
402 NumEntriesFunctor(
const num_packets_per_lid_type num_packets_per_lid_in,
403 const offsets_type& offsets_in,
404 const input_buffer_type& imports_in)
405 : num_packets_per_lid(num_packets_per_lid_in)
406 , offsets(offsets_in)
407 , imports(imports_in) {}
409 KOKKOS_INLINE_FUNCTION
void
410 operator()(
const MaxNumEntTag,
const LO i, value_type& update)
const {
412 const size_t num_bytes = num_packets_per_lid(i);
415 const char*
const in_buf = imports.data() + offsets(i);
417 const size_t num_ent =
static_cast<size_t>(num_ent_LO);
419 update = (update < num_ent) ? num_ent : update;
423 KOKKOS_INLINE_FUNCTION
void
424 join(
const MaxNumEntTag,
426 const value_type& src)
const {
427 if (dst < src) dst = src;
430 KOKKOS_INLINE_FUNCTION
void
431 operator()(
const TotNumEntTag,
const LO i, value_type& tot_num_ent)
const {
433 const size_t num_bytes = num_packets_per_lid(i);
436 const char*
const in_buf = imports.data() + offsets(i);
438 tot_num_ent +=
static_cast<size_t>(num_ent_LO);
450template <
class LO,
class DT,
class BDT>
453 const Kokkos::View<const size_t*, BDT>& num_packets_per_lid,
454 const Kokkos::View<const size_t*, DT>& offsets,
455 const Kokkos::View<const char*, BDT>& imports) {
456 typedef typename DT::execution_space XS;
457 typedef Kokkos::RangePolicy<XS, Kokkos::IndexType<LO>,
463 const LO numRowsToUnpack =
464 static_cast<LO
>(num_packets_per_lid.extent(0));
465 size_t max_num_ent = 0;
466 Kokkos::parallel_reduce(
"Max num entries in CRS",
467 range_policy(0, numRowsToUnpack),
468 functor, max_num_ent);
479template <
class LO,
class DT,
class BDT>
482 const Kokkos::View<const size_t*, BDT>& num_packets_per_lid,
483 const Kokkos::View<const size_t*, DT>& offsets,
484 const Kokkos::View<const char*, BDT>& imports) {
485 typedef typename DT::execution_space XS;
486 typedef Kokkos::RangePolicy<XS, Kokkos::IndexType<LO>, TotNumEntTag> range_policy;
487 size_t tot_num_ent = 0;
490 const LO numRowsToUnpack =
491 static_cast<LO
>(num_packets_per_lid.extent(0));
492 Kokkos::parallel_reduce(
"Total num entries in CRS to unpack",
493 range_policy(0, numRowsToUnpack),
494 functor, tot_num_ent);
499KOKKOS_INLINE_FUNCTION
501 unpackRowCount(
const char imports[],
503 const size_t num_bytes) {
508 const size_t p_num_bytes = PT::packValueCount(num_ent_LO);
509 if (p_num_bytes > num_bytes) {
510 return OrdinalTraits<size_t>::invalid();
512 const char*
const in_buf = imports + offset;
513 (void)PT::unpackValue(num_ent_LO, in_buf);
515 return static_cast<size_t>(num_ent_LO);
522template <
class View1,
class View2>
525 const View1& batches_per_lid,
527 using LO =
typename View2::value_type;
529 for (
size_t i = 0; i < batches_per_lid.extent(0); i++) {
530 for (
size_t batch_no = 0; batch_no < batches_per_lid(i); batch_no++) {
531 batch_info(batch, 0) =
static_cast<LO
>(i);
532 batch_info(batch, 1) = batch_no;
536 return batch == batch_info.extent(0);
546template <
class LocalMatrix,
class LocalMap,
class BufferDeviceType>
548 const LocalMatrix& local_matrix,
550 const Kokkos::View<const char*, BufferDeviceType>& imports,
551 const Kokkos::View<const size_t*, BufferDeviceType>& num_packets_per_lid,
554 using ST =
typename LocalMatrix::value_type;
557 using XS =
typename DT::execution_space;
558 const char prefix[] =
559 "Tpetra::Details::UnpackAndCombineCrsMatrixImpl::"
560 "unpackAndCombineIntoCrsMatrix: ";
562 const size_t num_import_lids =
static_cast<size_t>(import_lids.extent(0));
563 if (num_import_lids == 0) {
570 TEUCHOS_TEST_FOR_EXCEPTION(combine_mode ==
ABSMAX,
571 std::invalid_argument,
572 prefix <<
"ABSMAX combine mode is not yet implemented for a matrix that has a "
573 "static graph (i.e., was constructed with the CrsMatrix constructor "
574 "that takes a const CrsGraph pointer).");
576 TEUCHOS_TEST_FOR_EXCEPTION(combine_mode ==
INSERT,
577 std::invalid_argument,
578 prefix <<
"INSERT combine mode is not allowed if the matrix has a static graph "
579 "(i.e., was constructed with the CrsMatrix constructor that takes a "
580 "const CrsGraph pointer).");
583 TEUCHOS_TEST_FOR_EXCEPTION(!(combine_mode ==
ADD || combine_mode ==
REPLACE),
584 std::invalid_argument,
585 prefix <<
"Invalid combine mode; should never get "
586 "here! Please report this bug to the Tpetra developers.");
589 bool bad_num_import_lids =
590 num_import_lids !=
static_cast<size_t>(num_packets_per_lid.extent(0));
591 TEUCHOS_TEST_FOR_EXCEPTION(bad_num_import_lids,
592 std::invalid_argument,
593 prefix <<
"importLIDs.size() (" << num_import_lids <<
") != "
594 "numPacketsPerLID.size() ("
595 << num_packets_per_lid.extent(0) <<
").");
599 Kokkos::View<size_t*, DT> offsets(
"offsets", num_import_lids + 1);
605 const size_t batch_size = std::min(default_batch_size, max_num_ent);
608 size_t num_batches = 0;
609 Kokkos::View<LO* [2], DT> batch_info(
"", num_batches);
610 Kokkos::View<size_t*, DT> batches_per_lid(
"", num_import_lids);
612 Kokkos::parallel_reduce(
613 Kokkos::RangePolicy<XS, Kokkos::IndexType<size_t>>(0, num_import_lids),
614 KOKKOS_LAMBDA(
const size_t i,
size_t& batches) {
615 const size_t num_entries_in_row = unpackRowCount<LO>(
616 imports.data(), offsets(i), num_packets_per_lid(i));
618 (num_entries_in_row <= batch_size) ? 1 : num_entries_in_row / batch_size + (num_entries_in_row % batch_size != 0);
619 batches += batches_per_lid(i);
622 Kokkos::resize(batch_info, num_batches);
624 Kokkos::HostSpace host_space;
625 auto batches_per_lid_h = Kokkos::create_mirror_view(host_space, batches_per_lid);
627 Kokkos::deep_copy(XS(), batches_per_lid_h, batches_per_lid);
629 auto batch_info_h = Kokkos::create_mirror_view(host_space, batch_info);
634 Kokkos::deep_copy(XS(), batch_info, batch_info_h);
641 const bool atomic = XS().concurrency() != 1;
656 using policy = Kokkos::TeamPolicy<XS, Kokkos::IndexType<LO>>;
658 if (!Spaces::is_gpu_exec_space<XS>() || team_size == Teuchos::OrdinalTraits<size_t>::invalid()) {
659 Kokkos::parallel_for(policy(
static_cast<LO
>(num_batches), Kokkos::AUTO), f);
661 Kokkos::parallel_for(policy(
static_cast<LO
>(num_batches),
static_cast<int>(team_size)), f);
664 auto error_code = f.error();
665 TEUCHOS_TEST_FOR_EXCEPTION(
668 prefix <<
"UnpackCrsMatrixAndCombineFunctor reported error code " << error_code);
671template <
class LocalMatrix,
class BufferDeviceType>
674 const LocalMatrix& local_matrix,
676#ifdef KOKKOS_ENABLE_DEPRECATED_CODE_4
677 const Kokkos::View<const char*, BufferDeviceType, void, void>& imports,
678 const Kokkos::View<const size_t*, BufferDeviceType, void, void>& num_packets_per_lid,
680 const Kokkos::View<const char*, BufferDeviceType>& imports,
681 const Kokkos::View<const size_t*, BufferDeviceType>& num_packets_per_lid,
683 const size_t num_same_ids) {
684 using Kokkos::parallel_reduce;
685 typedef typename LocalMatrix::ordinal_type LO;
686 typedef typename LocalMatrix::device_type
device_type;
687 typedef typename device_type::execution_space XS;
688 typedef typename Kokkos::View<LO*, device_type>::size_type size_type;
689 typedef Kokkos::RangePolicy<XS, Kokkos::IndexType<LO>> range_policy;
690 typedef BufferDeviceType BDT;
696 num_items =
static_cast<LO
>(num_same_ids);
700 range_policy(0, num_items),
701 KOKKOS_LAMBDA(
const LO lid,
size_t& update) {
702 update +=
static_cast<size_t>(local_matrix.graph.row_map[lid + 1] - local_matrix.graph.row_map[lid]);
709 num_items =
static_cast<LO
>(permute_from_lids.extent(0));
713 range_policy(0, num_items),
714 KOKKOS_LAMBDA(
const LO i,
size_t& update) {
715 const LO lid = permute_from_lids(i);
716 update +=
static_cast<size_t>(local_matrix.graph.row_map[lid + 1] - local_matrix.graph.row_map[lid]);
724 const size_type np = num_packets_per_lid.extent(0);
725 Kokkos::View<size_t*, device_type> offsets(
"offsets", np + 1);
736template <
class LO,
class DT,
class BDT>
740 const Kokkos::View<const char*, BDT>& imports,
741 const Kokkos::View<const size_t*, BDT>& num_packets_per_lid,
743 using Kokkos::parallel_reduce;
744 typedef typename DT::execution_space XS;
746 typedef Kokkos::RangePolicy<XS, Kokkos::IndexType<size_type>> range_policy;
748 const size_t InvalidNum = OrdinalTraits<size_t>::invalid();
749 const size_type N = num_packets_per_lid.extent(0);
753 "Setup row pointers for remotes",
755 KOKKOS_LAMBDA(
const size_t i,
int& k_error) {
756 typedef typename std::remove_reference<
decltype(tgt_rowptr(0))>::type atomic_incr_type;
757 const size_t num_bytes = num_packets_per_lid(i);
758 const size_t offset = offsets(i);
759 const size_t num_ent = unpackRowCount<LO>(imports.data(), offset, num_bytes);
760 if (num_ent == InvalidNum) {
763 Kokkos::atomic_fetch_add(&tgt_rowptr(import_lids(i)), atomic_incr_type(num_ent));
771void makeCrsRowPtrFromLengths(
773 const Kokkos::View<size_t*, DT>& new_start_row) {
774 using Kokkos::parallel_scan;
775 typedef typename DT::execution_space XS;
776 typedef typename Kokkos::View<size_t*, DT>::size_type size_type;
777 typedef Kokkos::RangePolicy<XS, Kokkos::IndexType<size_type>> range_policy;
778 const size_type N = new_start_row.extent(0);
781 KOKKOS_LAMBDA(
const size_t& i,
size_t& update,
const bool&
final) {
782 auto cur_val = tgt_rowptr(i);
784 tgt_rowptr(i) = update;
785 new_start_row(i) = tgt_rowptr(i);
791template <
class LocalMatrix,
class LocalMap>
792void copyDataFromSameIDs(
796 const Kokkos::View<size_t*, typename LocalMap::device_type>& new_start_row,
799 const LocalMatrix& local_matrix,
800 const LocalMap& local_col_map,
801 const size_t num_same_ids,
803 using Kokkos::parallel_for;
806 typedef typename DT::execution_space XS;
807 typedef Kokkos::RangePolicy<XS, Kokkos::IndexType<size_t>> range_policy;
810 range_policy(0, num_same_ids),
811 KOKKOS_LAMBDA(
const size_t i) {
812 typedef typename std::remove_reference<
decltype(new_start_row(0))>::type atomic_incr_type;
814 const LO src_lid =
static_cast<LO
>(i);
815 size_t src_row = local_matrix.graph.row_map(src_lid);
817 const LO tgt_lid =
static_cast<LO
>(i);
818 const size_t tgt_row = tgt_rowptr(tgt_lid);
820 const size_t nsr = local_matrix.graph.row_map(src_lid + 1) - local_matrix.graph.row_map(src_lid);
821 Kokkos::atomic_fetch_add(&new_start_row(tgt_lid), atomic_incr_type(nsr));
823 for (
size_t j = local_matrix.graph.row_map(src_lid);
824 j < local_matrix.graph.row_map(src_lid + 1); ++j) {
825 LO src_col = local_matrix.graph.entries(j);
826 tgt_vals(tgt_row + j - src_row) = local_matrix.values(j);
827 tgt_colind(tgt_row + j - src_row) = local_col_map.getGlobalElement(src_col);
828 tgt_pids(tgt_row + j - src_row) = (src_pids(src_col) != my_pid) ? src_pids(src_col) : -1;
833template <
class LocalMatrix,
class LocalMap>
834void copyDataFromPermuteIDs(
838 const Kokkos::View<size_t*, typename LocalMap::device_type>& new_start_row,
843 const LocalMatrix& local_matrix,
844 const LocalMap& local_col_map,
846 using Kokkos::parallel_for;
849 typedef typename DT::execution_space XS;
850 typedef typename PackTraits<LO>::input_array_type::size_type size_type;
851 typedef Kokkos::RangePolicy<XS, Kokkos::IndexType<size_type>> range_policy;
853 const size_type num_permute_to_lids = permute_to_lids.extent(0);
856 range_policy(0, num_permute_to_lids),
857 KOKKOS_LAMBDA(
const size_t i) {
858 typedef typename std::remove_reference<
decltype(new_start_row(0))>::type atomic_incr_type;
860 const LO src_lid = permute_from_lids(i);
861 const size_t src_row = local_matrix.graph.row_map(src_lid);
863 const LO tgt_lid = permute_to_lids(i);
864 const size_t tgt_row = tgt_rowptr(tgt_lid);
866 size_t nsr = local_matrix.graph.row_map(src_lid + 1) - local_matrix.graph.row_map(src_lid);
867 Kokkos::atomic_fetch_add(&new_start_row(tgt_lid), atomic_incr_type(nsr));
869 for (
size_t j = local_matrix.graph.row_map(src_lid);
870 j < local_matrix.graph.row_map(src_lid + 1); ++j) {
871 LO src_col = local_matrix.graph.entries(j);
872 tgt_vals(tgt_row + j - src_row) = local_matrix.values(j);
873 tgt_colind(tgt_row + j - src_row) = local_col_map.getGlobalElement(src_col);
874 tgt_pids(tgt_row + j - src_row) = (src_pids(src_col) != my_pid) ? src_pids(src_col) : -1;
879template <
typename LocalMatrix,
typename LocalMap,
typename BufferDeviceType>
880int unpackAndCombineIntoCrsArrays2(
884 const Kokkos::View<size_t*, typename LocalMap::device_type>& new_start_row,
887#ifdef KOKKOS_ENABLE_DEPRECATED_CODE_4
888 const Kokkos::View<const char*, BufferDeviceType, void, void>& imports,
889 const Kokkos::View<const size_t*, BufferDeviceType, void, void>& num_packets_per_lid,
891 const Kokkos::View<const char*, BufferDeviceType>& imports,
892 const Kokkos::View<const size_t*, BufferDeviceType>& num_packets_per_lid,
897 const size_t bytes_per_value) {
898 using Kokkos::atomic_fetch_add;
899 using Kokkos::MemoryUnmanaged;
900 using Kokkos::parallel_reduce;
901 using Kokkos::subview;
903 using Tpetra::Details::PackTraits;
907 typedef typename LocalMatrix::value_type ST;
908 typedef typename DT::execution_space XS;
909 typedef typename Kokkos::View<LO*, DT>::size_type size_type;
910 typedef typename Kokkos::pair<size_type, size_type> slice;
911 typedef Kokkos::RangePolicy<XS, Kokkos::IndexType<size_type>> range_policy;
913 typedef View<int*, DT, MemoryUnmanaged> pids_out_type;
914 typedef View<GO*, DT, MemoryUnmanaged> gids_out_type;
915 typedef View<ST*, DT, MemoryUnmanaged> vals_out_type;
917 const size_t InvalidNum = OrdinalTraits<size_t>::invalid();
920 const size_type num_import_lids = import_lids.size();
924 "Unpack and combine into CRS",
925 range_policy(0, num_import_lids),
926 KOKKOS_LAMBDA(
const size_t i,
int& k_error) {
927 typedef typename std::remove_reference<
decltype(new_start_row(0))>::type atomic_incr_type;
928 const size_t num_bytes = num_packets_per_lid(i);
929 const size_t offset = offsets(i);
930 if (num_bytes == 0) {
934 size_t num_ent = unpackRowCount<LO>(imports.data(), offset, num_bytes);
935 if (num_ent == InvalidNum) {
939 const LO lcl_row = import_lids(i);
940 const size_t start_row = atomic_fetch_add(&new_start_row(lcl_row), atomic_incr_type(num_ent));
941 const size_t end_row = start_row + num_ent;
943 gids_out_type gids_out = subview(tgt_colind, slice(start_row, end_row));
944 vals_out_type vals_out = subview(tgt_vals, slice(start_row, end_row));
945 pids_out_type pids_out = subview(tgt_pids, slice(start_row, end_row));
948 imports.data(), offset, num_bytes,
949 num_ent, bytes_per_value);
952 for (
size_t j = 0; j < static_cast<size_t>(num_ent); ++j) {
953 const int pid = pids_out(j);
954 pids_out(j) = (pid != my_pid) ? pid : -1;
962template <
typename LocalMatrix,
typename LocalMap,
typename BufferDeviceType>
963void unpackAndCombineIntoCrsArrays(
964 const LocalMatrix& local_matrix,
965 const LocalMap& local_col_map,
967#ifdef KOKKOS_ENABLE_DEPRECATED_CODE_4
968 const Kokkos::View<const char*, BufferDeviceType, void, void>& imports,
969 const Kokkos::View<const size_t*, BufferDeviceType, void, void>& num_packets_per_lid,
971 const Kokkos::View<const char*, BufferDeviceType>& imports,
972 const Kokkos::View<const size_t*, BufferDeviceType>& num_packets_per_lid,
981 const size_t num_same_ids,
982 const size_t tgt_num_rows,
983 const size_t tgt_num_nonzeros,
984 const int my_tgt_pid,
985 const size_t bytes_per_value) {
986 using Kokkos::MemoryUnmanaged;
987 using Kokkos::parallel_for;
988 using Kokkos::subview;
990 using Tpetra::Details::PackTraits;
993 typedef typename DT::execution_space XS;
994 typedef typename Kokkos::View<LO*, DT>::size_type size_type;
995 typedef Kokkos::RangePolicy<XS, Kokkos::IndexType<size_t>> range_policy;
996 typedef BufferDeviceType BDT;
998 const char prefix[] =
"unpackAndCombineIntoCrsArrays: ";
1000 const size_t N = tgt_num_rows;
1004 const int my_pid = my_tgt_pid;
1008 range_policy(0, N + 1),
1009 KOKKOS_LAMBDA(
const size_t i) {
1015 range_policy(0, num_same_ids),
1016 KOKKOS_LAMBDA(
const size_t i) {
1017 const LO tgt_lid =
static_cast<LO
>(i);
1018 const LO src_lid =
static_cast<LO
>(i);
1019 tgt_rowptr(tgt_lid) = local_matrix.graph.row_map(src_lid + 1) - local_matrix.graph.row_map(src_lid);
1023 const size_type num_permute_to_lids = permute_to_lids.extent(0);
1025 range_policy(0, num_permute_to_lids),
1026 KOKKOS_LAMBDA(
const size_t i) {
1027 const LO tgt_lid = permute_to_lids(i);
1028 const LO src_lid = permute_from_lids(i);
1029 tgt_rowptr(tgt_lid) = local_matrix.graph.row_map(src_lid + 1) - local_matrix.graph.row_map(src_lid);
1033 const size_type num_import_lids = import_lids.extent(0);
1034 View<size_t*, DT> offsets(
"offsets", num_import_lids + 1);
1037#ifdef HAVE_TPETRA_DEBUG
1039 auto nth_offset_h = getEntryOnHost(offsets, num_import_lids);
1040 const bool condition =
1041 nth_offset_h !=
static_cast<size_t>(imports.extent(0));
1042 TEUCHOS_TEST_FOR_EXCEPTION(condition, std::logic_error, prefix <<
"The final offset in bytes " << nth_offset_h <<
" != imports.size() = " << imports.extent(0) <<
". Please report this bug to the Tpetra developers.");
1049 import_lids, imports, num_packets_per_lid, offsets);
1050 TEUCHOS_TEST_FOR_EXCEPTION(k_error != 0, std::logic_error, prefix <<
" Error transferring data to target row pointers. "
1051 "Please report this bug to the Tpetra developers.");
1055 View<size_t*, DT> new_start_row(
"new_start_row", N + 1);
1058 makeCrsRowPtrFromLengths(tgt_rowptr, new_start_row);
1061 copyDataFromSameIDs(tgt_colind, tgt_pids, tgt_vals, new_start_row,
1062 tgt_rowptr, src_pids, local_matrix, local_col_map, num_same_ids, my_pid);
1064 copyDataFromPermuteIDs(tgt_colind, tgt_pids, tgt_vals, new_start_row,
1065 tgt_rowptr, src_pids, permute_to_lids, permute_from_lids,
1066 local_matrix, local_col_map, my_pid);
1068 if (imports.extent(0) <= 0) {
1072 int unpack_err = unpackAndCombineIntoCrsArrays2(tgt_colind, tgt_pids,
1073 tgt_vals, new_start_row, offsets, import_lids, imports, num_packets_per_lid,
1074 local_matrix, local_col_map, my_pid, bytes_per_value);
1075 TEUCHOS_TEST_FOR_EXCEPTION(
1076 unpack_err != 0, std::logic_error, prefix <<
"unpack loop failed. This "
1077 "should never happen. Please report this bug to the Tpetra developers.");
1118template <
typename ST,
typename LO,
typename GO,
typename Node>
1121 const Teuchos::ArrayView<const char>& imports,
1122 const Teuchos::ArrayView<const size_t>& numPacketsPerLID,
1123 const Teuchos::ArrayView<const LO>& importLIDs,
1129 static_assert(std::is_same<device_type, typename local_matrix_device_type::device_type>::value,
1130 "Node::device_type and LocalMatrix::device_type must be the same.");
1138 auto num_packets_per_lid_d =
1140 numPacketsPerLID.size(),
true,
"num_packets_per_lid");
1142 auto import_lids_d =
1144 importLIDs.size(),
true,
"import_lids");
1148 imports.size(),
true,
"imports");
1151 auto local_col_map = sourceMatrix.
getColMap()->getLocalMap();
1163 local_matrix, local_col_map, imports_d, num_packets_per_lid_d,
1164 import_lids_d, combineMode);
1167template <
typename ST,
typename LO,
typename GO,
typename NT>
1168void unpackCrsMatrixAndCombineNew(
1170 Kokkos::DualView<
char*,
1173 Kokkos::DualView<
size_t*,
1176 const Kokkos::DualView<
const LO*,
1183 using device_type =
typename crs_matrix_type::device_type;
1187 static_assert(std::is_same<device_type, typename local_matrix_device_type::device_type>::value,
1188 "crs_matrix_type::device_type and local_matrix_device_type::device_type "
1189 "must be the same.");
1191 if (numPacketsPerLID.need_sync_device()) {
1192 numPacketsPerLID.sync_device();
1194 auto num_packets_per_lid_d = numPacketsPerLID.view_device();
1196 TEUCHOS_ASSERT(!importLIDs.need_sync_device());
1197 auto import_lids_d = importLIDs.view_device();
1199 if (imports.need_sync_device()) {
1200 imports.sync_device();
1202 auto imports_d = imports.view_device();
1205 auto local_col_map = sourceMatrix.
getColMap()->getLocalMap();
1206 typedef decltype(local_col_map) local_map_type;
1209 local_matrix_device_type,
1211 buffer_device_type>(local_matrix, local_col_map, imports_d, num_packets_per_lid_d,
1212 import_lids_d, combineMode);
1270template <
typename Scalar,
typename LocalOrdinal,
typename GlobalOrdinal,
typename Node>
1274 const Teuchos::ArrayView<const LocalOrdinal>& importLIDs,
1275 const Teuchos::ArrayView<const char>& imports,
1276 const Teuchos::ArrayView<const size_t>& numPacketsPerLID,
1280 const Teuchos::ArrayView<const LocalOrdinal>& permuteToLIDs,
1281 const Teuchos::ArrayView<const LocalOrdinal>& permuteFromLIDs) {
1282 using Kokkos::MemoryUnmanaged;
1284 typedef typename Node::device_type DT;
1285 const char prefix[] =
"unpackAndCombineWithOwningPIDsCount: ";
1287 TEUCHOS_TEST_FOR_EXCEPTION(permuteToLIDs.size() != permuteFromLIDs.size(), std::invalid_argument,
1288 prefix <<
"permuteToLIDs.size() = " << permuteToLIDs.size() <<
" != "
1289 "permuteFromLIDs.size() = "
1290 << permuteFromLIDs.size() <<
".");
1294 TEUCHOS_TEST_FOR_EXCEPTION(!locallyIndexed, std::invalid_argument, prefix <<
"The input "
1295 "CrsMatrix 'sourceMatrix' must be locally indexed.");
1296 TEUCHOS_TEST_FOR_EXCEPTION(importLIDs.size() != numPacketsPerLID.size(), std::invalid_argument,
1297 prefix <<
"importLIDs.size() = " << importLIDs.size() <<
" != "
1298 "numPacketsPerLID.size() = "
1299 << numPacketsPerLID.size() <<
".");
1303 using kokkos_device_type = Kokkos::Device<
typename Node::device_type::execution_space,
1304 Tpetra::Details::DefaultTypes::comm_buffer_memory_space<typename Node::device_type>>;
1306#ifdef KOKKOS_ENABLE_DEPRECATED_CODE_4
1307 Kokkos::View<LocalOrdinal const*, kokkos_device_type, void, void> permute_from_lids_d =
1309 Kokkos::View<LocalOrdinal const*, kokkos_device_type> permute_from_lids_d =
1312 permuteFromLIDs.getRawPtr(),
1313 permuteFromLIDs.size(),
true,
1314 "permute_from_lids");
1316#ifdef KOKKOS_ENABLE_DEPRECATED_CODE_4
1317 Kokkos::View<const char*, kokkos_device_type, void, void> imports_d =
1319 Kokkos::View<const char*, kokkos_device_type> imports_d =
1322 imports.getRawPtr(),
1323 imports.size(),
true,
1326#ifdef KOKKOS_ENABLE_DEPRECATED_CODE_4
1327 Kokkos::View<const size_t*, kokkos_device_type, void, void> num_packets_per_lid_d =
1329 Kokkos::View<const size_t*, kokkos_device_type> num_packets_per_lid_d =
1332 numPacketsPerLID.getRawPtr(),
1333 numPacketsPerLID.size(),
true,
1334 "num_packets_per_lid");
1336 return UnpackAndCombineCrsMatrixImpl::unpackAndCombineWithOwningPIDsCount(
1337 local_matrix, permute_from_lids_d, imports_d,
1338 num_packets_per_lid_d, numSameIDs);
1356template <
typename Scalar,
typename LocalOrdinal,
typename GlobalOrdinal,
typename Node>
1359 const Kokkos::View<LocalOrdinal
const*,
1360 Kokkos::Device<
typename Node::device_type::execution_space,
1361 Tpetra::Details::DefaultTypes::comm_buffer_memory_space<typename Node::device_type>>
1362#ifdef KOKKOS_ENABLE_DEPRECATED_CODE_4
1368 const Kokkos::View<
const char*,
1369 Kokkos::Device<
typename Node::device_type::execution_space,
1370 Tpetra::Details::DefaultTypes::comm_buffer_memory_space<typename Node::device_type>>
1371#ifdef KOKKOS_ENABLE_DEPRECATED_CODE_4
1377 const Kokkos::View<
const size_t*,
1378 Kokkos::Device<
typename Node::device_type::execution_space,
1379 Tpetra::Details::DefaultTypes::comm_buffer_memory_space<typename Node::device_type>>
1380#ifdef KOKKOS_ENABLE_DEPRECATED_CODE_4
1385 num_packets_per_lid_d,
1386 const size_t numSameIDs,
1387 const Kokkos::View<LocalOrdinal
const*,
1388 Kokkos::Device<
typename Node::device_type::execution_space,
1389 Tpetra::Details::DefaultTypes::comm_buffer_memory_space<typename Node::device_type>>
1390#ifdef KOKKOS_ENABLE_DEPRECATED_CODE_4
1396 const Kokkos::View<LocalOrdinal
const*,
1397 Kokkos::Device<
typename Node::device_type::execution_space,
1398 Tpetra::Details::DefaultTypes::comm_buffer_memory_space<typename Node::device_type>>
1399#ifdef KOKKOS_ENABLE_DEPRECATED_CODE_4
1404 permute_from_lids_d,
1405 size_t TargetNumRows,
1406 const int MyTargetPID,
1407 Kokkos::View<size_t*, typename Node::device_type>& crs_rowptr_d,
1408 Kokkos::View<GlobalOrdinal*, typename Node::device_type>& crs_colind_d,
1410 const Teuchos::ArrayView<const int>& SourcePids,
1411 Kokkos::View<int*, typename Node::device_type>& TargetPids) {
1415 using Kokkos::deep_copy;
1418 using Teuchos::ArrayView;
1419 using Teuchos::outArg;
1420 using Teuchos::REDUCE_MAX;
1421 using Teuchos::reduceAll;
1423 typedef typename Node::device_type DT;
1426 typedef typename matrix_type::impl_scalar_type ST;
1428 const char prefix[] =
"Tpetra::Details::unpackAndCombineIntoCrsArrays_new: ";
1429 Teuchos::RCP<Tpetra::Details::ProfilingRegion> tm;
1431 using Kokkos::MemoryUnmanaged;
1433 TEUCHOS_TEST_FOR_EXCEPTION(permute_to_lids_d.size() != permute_from_lids_d.size(), std::invalid_argument,
1434 prefix <<
"permute_to_lids_d.size() = " << permute_to_lids_d.size() <<
" != "
1435 "permute_from_lids_d.size() = "
1436 << permute_from_lids_d.size() <<
".");
1440 TEUCHOS_TEST_FOR_EXCEPTION(!locallyIndexed, std::invalid_argument, prefix <<
"The input "
1441 "CrsMatrix 'sourceMatrix' must be locally indexed.");
1442 TEUCHOS_TEST_FOR_EXCEPTION(((
size_t)import_lids_d.size()) != num_packets_per_lid_d.size(), std::invalid_argument,
1443 prefix <<
"import_lids_d.size() = " << import_lids_d.size() <<
" != "
1444 "num_packets_per_lid_d.size() = "
1445 << num_packets_per_lid_d.size() <<
".");
1451 size_t TargetNumNonzeros =
1452 UnpackAndCombineCrsMatrixImpl::unpackAndCombineWithOwningPIDsCount(
1453 local_matrix, permute_from_lids_d, imports_d,
1454 num_packets_per_lid_d, numSameIDs);
1458 Kokkos::resize(crs_rowptr_d, TargetNumRows + 1);
1459 Kokkos::resize(crs_colind_d, TargetNumNonzeros);
1460 Kokkos::resize(crs_vals_d, TargetNumNonzeros);
1463 TEUCHOS_TEST_FOR_EXCEPTION(
1464 permute_to_lids_d.size() != permute_from_lids_d.size(), std::invalid_argument,
1465 prefix <<
"permuteToLIDs.size() = " << permute_to_lids_d.size()
1466 <<
"!= permute_from_lids_d.size() = " << permute_from_lids_d.size() <<
".");
1468 if (
static_cast<size_t>(TargetPids.size()) != TargetNumNonzeros) {
1469 Kokkos::resize(TargetPids, TargetNumNonzeros);
1474 auto local_col_map = sourceMatrix.
getColMap()->getLocalMap();
1482 SourcePids.size(),
true,
"src_pids");
1486 size_t bytes_per_value = 0;
1499 size_t bytes_per_value_l = 0;
1500 if (local_matrix.values.extent(0) > 0) {
1501 const ST& val = local_matrix.values(0);
1504 const ST& val = crs_vals_d(0);
1507 Teuchos::reduceAll<int, size_t>(*(sourceMatrix.
getComm()),
1508 Teuchos::REDUCE_MAX,
1510 outArg(bytes_per_value));
1514 UnpackAndCombineCrsMatrixImpl::unpackAndCombineIntoCrsArrays(
1515 local_matrix, local_col_map, import_lids_d, imports_d,
1516 num_packets_per_lid_d, permute_to_lids_d, permute_from_lids_d,
1517 crs_rowptr_d, crs_colind_d, crs_vals_d, src_pids_d, TargetPids,
1518 numSameIDs, TargetNumRows, TargetNumNonzeros, MyTargetPID,
1525 Kokkos::parallel_for(
1526 "setLocalEntriesToPID", Kokkos::RangePolicy<typename DT::execution_space>(0, TargetPids.size()), KOKKOS_LAMBDA(
const size_t i) {
1527 if (TargetPids(i) == -1) TargetPids(i) = MyTargetPID;
1532template <
typename Scalar,
typename LocalOrdinal,
typename GlobalOrdinal,
typename Node>
1535 const Kokkos::View<LocalOrdinal
const*,
1536 Kokkos::Device<
typename Node::device_type::execution_space,
1537 Tpetra::Details::DefaultTypes::comm_buffer_memory_space<typename Node::device_type>>
1538#ifdef KOKKOS_ENABLE_DEPRECATED_CODE_4
1544 const Kokkos::View<
const char*,
1545 Kokkos::Device<
typename Node::device_type::execution_space,
1546 Tpetra::Details::DefaultTypes::comm_buffer_memory_space<typename Node::device_type>>
1547#ifdef KOKKOS_ENABLE_DEPRECATED_CODE_4
1553 const Kokkos::View<
const size_t*,
1554 Kokkos::Device<
typename Node::device_type::execution_space,
1555 Tpetra::Details::DefaultTypes::comm_buffer_memory_space<typename Node::device_type>>
1556#ifdef KOKKOS_ENABLE_DEPRECATED_CODE_4
1561 num_packets_per_lid_d,
1562 const size_t numSameIDs,
1563 const Kokkos::View<LocalOrdinal
const*,
1564 Kokkos::Device<
typename Node::device_type::execution_space,
1565 Tpetra::Details::DefaultTypes::comm_buffer_memory_space<typename Node::device_type>>
1566#ifdef KOKKOS_ENABLE_DEPRECATED_CODE_4
1572 const Kokkos::View<LocalOrdinal
const*,
1573 Kokkos::Device<
typename Node::device_type::execution_space,
1574 Tpetra::Details::DefaultTypes::comm_buffer_memory_space<typename Node::device_type>>
1575#ifdef KOKKOS_ENABLE_DEPRECATED_CODE_4
1580 permute_from_lids_d,
1581 size_t TargetNumRows,
1582 const int MyTargetPID,
1583 Teuchos::ArrayRCP<size_t>& CRS_rowptr,
1584 Teuchos::ArrayRCP<GlobalOrdinal>& CRS_colind,
1585 Teuchos::ArrayRCP<Scalar>& CRS_vals,
1586 const Teuchos::ArrayView<const int>& SourcePids,
1587 Teuchos::Array<int>& TargetPids) {
1591 using Kokkos::deep_copy;
1594 using Teuchos::ArrayView;
1595 using Teuchos::outArg;
1596 using Teuchos::REDUCE_MAX;
1597 using Teuchos::reduceAll;
1599 typedef typename Node::device_type DT;
1602 typedef typename matrix_type::impl_scalar_type ST;
1604 const char prefix[] =
"Tpetra::Details::unpackAndCombineIntoCrsArrays_new: ";
1605 Teuchos::RCP<Tpetra::Details::ProfilingRegion> tm;
1607 using Kokkos::MemoryUnmanaged;
1609 TEUCHOS_TEST_FOR_EXCEPTION(permute_to_lids_d.size() != permute_from_lids_d.size(), std::invalid_argument,
1610 prefix <<
"permute_to_lids_d.size() = " << permute_to_lids_d.size() <<
" != "
1611 "permute_from_lids_d.size() = "
1612 << permute_from_lids_d.size() <<
".");
1616 TEUCHOS_TEST_FOR_EXCEPTION(!locallyIndexed, std::invalid_argument, prefix <<
"The input "
1617 "CrsMatrix 'sourceMatrix' must be locally indexed.");
1618 TEUCHOS_TEST_FOR_EXCEPTION(((
size_t)import_lids_d.size()) != num_packets_per_lid_d.size(), std::invalid_argument,
1619 prefix <<
"import_lids_d.size() = " << import_lids_d.size() <<
" != "
1620 "num_packets_per_lid_d.size() = "
1621 << num_packets_per_lid_d.size() <<
".");
1627 size_t TargetNumNonzeros =
1628 UnpackAndCombineCrsMatrixImpl::unpackAndCombineWithOwningPIDsCount(
1629 local_matrix, permute_from_lids_d, imports_d,
1630 num_packets_per_lid_d, numSameIDs);
1634 CRS_rowptr.resize(TargetNumRows + 1);
1635 CRS_colind.resize(TargetNumNonzeros);
1636 CRS_vals.resize(TargetNumNonzeros);
1637 Teuchos::ArrayRCP<ST>
const& CRS_vals_impl_scalar_type = Teuchos::arcp_reinterpret_cast<ST>(CRS_vals);
1640 TEUCHOS_TEST_FOR_EXCEPTION(
1641 permute_to_lids_d.size() != permute_from_lids_d.size(), std::invalid_argument,
1642 prefix <<
"permuteToLIDs.size() = " << permute_to_lids_d.size()
1643 <<
"!= permute_from_lids_d.size() = " << permute_from_lids_d.size() <<
".");
1646 if (
static_cast<size_t>(TargetPids.size()) != TargetNumNonzeros) {
1647 TargetPids.resize(TargetNumNonzeros);
1649 TargetPids.assign(TargetNumNonzeros, -1);
1652 auto local_col_map = sourceMatrix.
getColMap()->getLocalMap();
1660 CRS_rowptr.size(),
true,
"crs_rowptr");
1664 CRS_colind.size(),
true,
"crs_colidx");
1665#ifdef HAVE_TPETRA_INST_COMPLEX_DOUBLE
1666 static_assert(!std::is_same<
1667 typename std::remove_const<
1668 typename std::decay<
1669 decltype(CRS_vals_impl_scalar_type)>::type::value_type>::type,
1670 std::complex<double>>::value,
1671 "CRS_vals::value_type is std::complex<double>; this should never happen"
1672 ", since std::complex does not work in Kokkos::View objects.");
1677 CRS_vals_impl_scalar_type.size(),
true,
"crs_vals");
1679#ifdef HAVE_TPETRA_INST_COMPLEX_DOUBLE
1680 static_assert(!std::is_same<
1681 typename decltype(crs_vals_d)::non_const_value_type,
1682 std::complex<double>>::value,
1683 "crs_vals_d::non_const_value_type is std::complex<double>; this should "
1684 "never happen, since std::complex does not work in Kokkos::View objects.");
1689 SourcePids.size(),
true,
"src_pids");
1693 TargetPids.size(),
true,
"tgt_pids");
1697 size_t bytes_per_value = 0;
1710 size_t bytes_per_value_l = 0;
1711 if (local_matrix.values.extent(0) > 0) {
1712 const ST& val = local_matrix.values(0);
1715 const ST& val = crs_vals_d(0);
1718 Teuchos::reduceAll<int, size_t>(*(sourceMatrix.
getComm()),
1719 Teuchos::REDUCE_MAX,
1721 outArg(bytes_per_value));
1724#ifdef HAVE_TPETRA_INST_COMPLEX_DOUBLE
1725 static_assert(!std::is_same<
1726 typename decltype(crs_vals_d)::non_const_value_type,
1727 std::complex<double>>::value,
1728 "crs_vals_d::non_const_value_type is std::complex<double>; this should "
1729 "never happen, since std::complex does not work in Kokkos::View objects.");
1733 UnpackAndCombineCrsMatrixImpl::unpackAndCombineIntoCrsArrays(
1734 local_matrix, local_col_map, import_lids_d, imports_d,
1735 num_packets_per_lid_d, permute_to_lids_d, permute_from_lids_d,
1736 crs_rowptr_d, crs_colind_d, crs_vals_d, src_pids_d, tgt_pids_d,
1737 numSameIDs, TargetNumRows, TargetNumNonzeros, MyTargetPID,
1743 typename decltype(crs_rowptr_d)::host_mirror_type crs_rowptr_h(
1744 CRS_rowptr.getRawPtr(), CRS_rowptr.size());
1748 typename decltype(crs_colind_d)::host_mirror_type crs_colind_h(
1749 CRS_colind.getRawPtr(), CRS_colind.size());
1753 typename decltype(crs_vals_d)::host_mirror_type crs_vals_h(
1754 CRS_vals_impl_scalar_type.getRawPtr(), CRS_vals_impl_scalar_type.size());
1758 typename decltype(tgt_pids_d)::host_mirror_type tgt_pids_h(
1759 TargetPids.getRawPtr(), TargetPids.size());
1768#define TPETRA_DETAILS_UNPACKCRSMATRIXANDCOMBINE_INSTANT_KOKKOS_DEPRECATED_CODE_4_ON(ST, LO, GO, NT) \
1770 Details::unpackCrsMatrixAndCombine<ST, LO, GO, NT>( \
1771 const CrsMatrix<ST, LO, GO, NT>&, \
1772 const Teuchos::ArrayView<const char>&, \
1773 const Teuchos::ArrayView<const size_t>&, \
1774 const Teuchos::ArrayView<const LO>&, \
1778 Details::unpackAndCombineWithOwningPIDsCount<ST, LO, GO, NT>( \
1779 const CrsMatrix<ST, LO, GO, NT>&, \
1780 const Teuchos::ArrayView<const LO>&, \
1781 const Teuchos::ArrayView<const char>&, \
1782 const Teuchos::ArrayView<const size_t>&, \
1786 const Teuchos::ArrayView<const LO>&, \
1787 const Teuchos::ArrayView<const LO>&); \
1789 Details::unpackCrsMatrixAndCombineNew<ST, LO, GO, NT>( \
1790 const CrsMatrix<ST, LO, GO, NT>&, \
1791 Kokkos::DualView<char*, typename DistObject<char, LO, GO, NT>::buffer_device_type>, \
1792 Kokkos::DualView<size_t*, typename DistObject<char, LO, GO, NT>::buffer_device_type>, \
1793 const Kokkos::DualView<const LO*, typename DistObject<char, LO, GO, NT>::buffer_device_type>&, \
1795 const CombineMode); \
1797 Details::unpackAndCombineIntoCrsArrays<ST, LO, GO, NT>( \
1798 const CrsMatrix<ST, LO, GO, NT>&, \
1799 const Kokkos::View<LO const*, \
1800 Kokkos::Device<typename NT::device_type::execution_space, \
1801 Tpetra::Details::DefaultTypes::comm_buffer_memory_space<typename NT::device_type>>, \
1803 const Kokkos::View<const char*, \
1804 Kokkos::Device<typename NT::device_type::execution_space, \
1805 Tpetra::Details::DefaultTypes::comm_buffer_memory_space<typename NT::device_type>>, \
1807 const Kokkos::View<const size_t*, \
1808 Kokkos::Device<typename NT::device_type::execution_space, \
1809 Tpetra::Details::DefaultTypes::comm_buffer_memory_space<typename NT::device_type>>, \
1812 const Kokkos::View<LO const*, \
1813 Kokkos::Device<typename NT::device_type::execution_space, \
1814 Tpetra::Details::DefaultTypes::comm_buffer_memory_space<typename NT::device_type>>, \
1816 const Kokkos::View<LO const*, \
1817 Kokkos::Device<typename NT::device_type::execution_space, \
1818 Tpetra::Details::DefaultTypes::comm_buffer_memory_space<typename NT::device_type>>, \
1822 Kokkos::View<size_t*, typename NT::device_type>&, \
1823 Kokkos::View<GO*, typename NT::device_type>&, \
1824 Kokkos::View<typename CrsMatrix<ST, LO, GO, NT>::impl_scalar_type*, typename NT::device_type>&, \
1825 const Teuchos::ArrayView<const int>&, \
1826 Kokkos::View<int*, typename NT::device_type>&); \
1828 Details::unpackAndCombineIntoCrsArrays<ST, LO, GO, NT>( \
1829 const CrsMatrix<ST, LO, GO, NT>&, \
1830 const Kokkos::View<LO const*, \
1831 Kokkos::Device<typename NT::device_type::execution_space, \
1832 Tpetra::Details::DefaultTypes::comm_buffer_memory_space<typename NT::device_type>>, \
1834 const Kokkos::View<const char*, \
1835 Kokkos::Device<typename NT::device_type::execution_space, \
1836 Tpetra::Details::DefaultTypes::comm_buffer_memory_space<typename NT::device_type>>, \
1838 const Kokkos::View<const size_t*, \
1839 Kokkos::Device<typename NT::device_type::execution_space, \
1840 Tpetra::Details::DefaultTypes::comm_buffer_memory_space<typename NT::device_type>>, \
1843 const Kokkos::View<LO const*, \
1844 Kokkos::Device<typename NT::device_type::execution_space, \
1845 Tpetra::Details::DefaultTypes::comm_buffer_memory_space<typename NT::device_type>>, \
1847 const Kokkos::View<LO const*, \
1848 Kokkos::Device<typename NT::device_type::execution_space, \
1849 Tpetra::Details::DefaultTypes::comm_buffer_memory_space<typename NT::device_type>>, \
1853 Teuchos::ArrayRCP<size_t>&, \
1854 Teuchos::ArrayRCP<GO>&, \
1855 Teuchos::ArrayRCP<ST>&, \
1856 const Teuchos::ArrayView<const int>&, \
1857 Teuchos::Array<int>&);
1859#define TPETRA_DETAILS_UNPACKCRSMATRIXANDCOMBINE_INSTANT_KOKKOS_DEPRECATED_CODE_4_OFF(ST, LO, GO, NT) \
1861 Details::unpackCrsMatrixAndCombine<ST, LO, GO, NT>( \
1862 const CrsMatrix<ST, LO, GO, NT>&, \
1863 const Teuchos::ArrayView<const char>&, \
1864 const Teuchos::ArrayView<const size_t>&, \
1865 const Teuchos::ArrayView<const LO>&, \
1869 Details::unpackAndCombineWithOwningPIDsCount<ST, LO, GO, NT>( \
1870 const CrsMatrix<ST, LO, GO, NT>&, \
1871 const Teuchos::ArrayView<const LO>&, \
1872 const Teuchos::ArrayView<const char>&, \
1873 const Teuchos::ArrayView<const size_t>&, \
1877 const Teuchos::ArrayView<const LO>&, \
1878 const Teuchos::ArrayView<const LO>&); \
1880 Details::unpackCrsMatrixAndCombineNew<ST, LO, GO, NT>( \
1881 const CrsMatrix<ST, LO, GO, NT>&, \
1882 Kokkos::DualView<char*, typename DistObject<char, LO, GO, NT>::buffer_device_type>, \
1883 Kokkos::DualView<size_t*, typename DistObject<char, LO, GO, NT>::buffer_device_type>, \
1884 const Kokkos::DualView<const LO*, typename DistObject<char, LO, GO, NT>::buffer_device_type>&, \
1886 const CombineMode); \
1888 Details::unpackAndCombineIntoCrsArrays<ST, LO, GO, NT>( \
1889 const CrsMatrix<ST, LO, GO, NT>&, \
1890 const Kokkos::View<LO const*, \
1891 Kokkos::Device<typename NT::device_type::execution_space, \
1892 Tpetra::Details::DefaultTypes::comm_buffer_memory_space<typename NT::device_type>>>, \
1893 const Kokkos::View<const char*, \
1894 Kokkos::Device<typename NT::device_type::execution_space, \
1895 Tpetra::Details::DefaultTypes::comm_buffer_memory_space<typename NT::device_type>>>, \
1896 const Kokkos::View<const size_t*, \
1897 Kokkos::Device<typename NT::device_type::execution_space, \
1898 Tpetra::Details::DefaultTypes::comm_buffer_memory_space<typename NT::device_type>>>, \
1900 const Kokkos::View<LO const*, \
1901 Kokkos::Device<typename NT::device_type::execution_space, \
1902 Tpetra::Details::DefaultTypes::comm_buffer_memory_space<typename NT::device_type>>>, \
1903 const Kokkos::View<LO const*, \
1904 Kokkos::Device<typename NT::device_type::execution_space, \
1905 Tpetra::Details::DefaultTypes::comm_buffer_memory_space<typename NT::device_type>>>, \
1908 Kokkos::View<size_t*, typename NT::device_type>&, \
1909 Kokkos::View<GO*, typename NT::device_type>&, \
1910 Kokkos::View<typename CrsMatrix<ST, LO, GO, NT>::impl_scalar_type*, typename NT::device_type>&, \
1911 const Teuchos::ArrayView<const int>&, \
1912 Kokkos::View<int*, typename NT::device_type>&); \
1914 Details::unpackAndCombineIntoCrsArrays<ST, LO, GO, NT>( \
1915 const CrsMatrix<ST, LO, GO, NT>&, \
1916 const Kokkos::View<LO const*, \
1917 Kokkos::Device<typename NT::device_type::execution_space, \
1918 Tpetra::Details::DefaultTypes::comm_buffer_memory_space<typename NT::device_type>>>, \
1919 const Kokkos::View<const char*, \
1920 Kokkos::Device<typename NT::device_type::execution_space, \
1921 Tpetra::Details::DefaultTypes::comm_buffer_memory_space<typename NT::device_type>>>, \
1922 const Kokkos::View<const size_t*, \
1923 Kokkos::Device<typename NT::device_type::execution_space, \
1924 Tpetra::Details::DefaultTypes::comm_buffer_memory_space<typename NT::device_type>>>, \
1926 const Kokkos::View<LO const*, \
1927 Kokkos::Device<typename NT::device_type::execution_space, \
1928 Tpetra::Details::DefaultTypes::comm_buffer_memory_space<typename NT::device_type>>>, \
1929 const Kokkos::View<LO const*, \
1930 Kokkos::Device<typename NT::device_type::execution_space, \
1931 Tpetra::Details::DefaultTypes::comm_buffer_memory_space<typename NT::device_type>>>, \
1934 Teuchos::ArrayRCP<size_t>&, \
1935 Teuchos::ArrayRCP<GO>&, \
1936 Teuchos::ArrayRCP<ST>&, \
1937 const Teuchos::ArrayView<const int>&, \
1938 Teuchos::Array<int>&);
1940#ifdef KOKKOS_ENABLE_DEPRECATED_CODE_4
1941#define TPETRA_DETAILS_UNPACKCRSMATRIXANDCOMBINE_INSTANT(ST, LO, GO, NT) \
1942 TPETRA_DETAILS_UNPACKCRSMATRIXANDCOMBINE_INSTANT_KOKKOS_DEPRECATED_CODE_4_ON(ST, LO, GO, NT)
1944#define TPETRA_DETAILS_UNPACKCRSMATRIXANDCOMBINE_INSTANT(ST, LO, GO, NT) \
1945 TPETRA_DETAILS_UNPACKCRSMATRIXANDCOMBINE_INSTANT_KOKKOS_DEPRECATED_CODE_4_OFF(ST, LO, GO, NT)
Declaration of the Tpetra::CrsMatrix class.
Import KokkosSparse::OrdinalTraits, a traits class for "invalid" (flag) values of integer types,...
Declaration and generic definition of traits class that tells Tpetra::CrsMatrix how to pack and unpac...
Declaration and definition of Tpetra::Details::castAwayConstDualView, an implementation detail of Tpe...
Declare and define the functions Tpetra::Details::computeOffsetsFromCounts and Tpetra::computeOffsets...
Functions that wrap Kokkos::create_mirror_view, in order to avoid deep copies when not necessary,...
Declaration and definition of Tpetra::Details::getEntryOnHost.
KOKKOS_FUNCTION int unpackRow(const typename PackTraits< GO >::output_array_type &gids_out, const typename PackTraits< int >::output_array_type &pids_out, const typename PackTraits< ST >::output_array_type &vals_out, const char imports[], const size_t offset, const size_t num_bytes, const size_t num_ent, const size_t bytes_per_value)
Unpack a single row of a CrsMatrix.
int setupRowPointersForRemotes(const typename PackTraits< size_t >::output_array_type &tgt_rowptr, const typename PackTraits< LO >::input_array_type &import_lids, const Kokkos::View< const char *, BDT > &imports, const Kokkos::View< const size_t *, BDT > &num_packets_per_lid, const typename PackTraits< size_t >::input_array_type &offsets)
Setup row pointers for remotes.
size_t compute_total_num_entries(const Kokkos::View< const size_t *, BDT > &num_packets_per_lid, const Kokkos::View< const size_t *, DT > &offsets, const Kokkos::View< const char *, BDT > &imports)
Total number of entries in any row of the packed matrix.
void unpackAndCombineIntoCrsMatrix(const LocalMatrix &local_matrix, const LocalMap &local_map, const Kokkos::View< const char *, BufferDeviceType > &imports, const Kokkos::View< const size_t *, BufferDeviceType > &num_packets_per_lid, const typename PackTraits< typename LocalMap::local_ordinal_type >::input_array_type import_lids, const Tpetra::CombineMode combine_mode)
Perform the unpack operation for the matrix.
size_t compute_maximum_num_entries(const Kokkos::View< const size_t *, BDT > &num_packets_per_lid, const Kokkos::View< const size_t *, DT > &offsets, const Kokkos::View< const char *, BDT > &imports)
Maximum number of entries in any row of the packed matrix.
bool compute_batch_info(const View1 &batches_per_lid, View2 &batch_info)
Compute the index and batch number associated with each batch.
Sparse matrix that presents a row-oriented interface that lets users read or modify entries.
Teuchos::RCP< const Teuchos::Comm< int > > getComm() const override
The communicator over which the matrix is distributed.
TPETRA_DETAILS_ALWAYS_INLINE local_matrix_device_type getLocalMatrixDevice() const
The local sparse matrix.
Teuchos::RCP< const map_type > getColMap() const override
The Map that describes the column distribution in this matrix.
KokkosSparse::CrsMatrix< impl_scalar_type, local_ordinal_type, device_type, void, typename local_graph_device_type::size_type > local_matrix_device_type
The specialization of Kokkos::CrsMatrix that represents the part of the sparse matrix on each MPI pro...
bool isLocallyIndexed() const override
Whether the matrix is locally indexed on the calling process.
typename row_matrix_type::impl_scalar_type impl_scalar_type
The type used internally in place of Scalar.
static size_t hierarchicalUnpackBatchSize()
Size of batch for hierarchical unpacking.
static size_t hierarchicalUnpackTeamSize()
Size of team for hierarchical unpacking.
"Local" part of Map suitable for Kokkos kernels.
LocalOrdinal local_ordinal_type
The type of local indices.
GlobalOrdinal global_ordinal_type
The type of global indices.
DeviceType device_type
The device type.
Kokkos::parallel_reduce functor to determine the number of entries (to unpack) in a KokkosSparse::Crs...
Base class for distributed Tpetra objects that support data redistribution.
Kokkos::Device< typename device_type::execution_space, buffer_memory_space > buffer_device_type
Kokkos::Device specialization for communication buffers.
Nonmember function that computes a residual Computes R = B - A * X.
void unpackAndCombineIntoCrsArrays(const CrsGraph< LO, GO, NT > &sourceGraph, const Teuchos::ArrayView< const LO > &importLIDs, const Teuchos::ArrayView< const typename CrsGraph< LO, GO, NT >::packet_type > &imports, const Teuchos::ArrayView< const size_t > &numPacketsPerLID, const size_t constantNumPackets, const CombineMode combineMode, const size_t numSameIDs, const Teuchos::ArrayView< const LO > &permuteToLIDs, const Teuchos::ArrayView< const LO > &permuteFromLIDs, size_t TargetNumRows, size_t TargetNumNonzeros, const int MyTargetPID, const Teuchos::ArrayView< size_t > &CRS_rowptr, const Teuchos::ArrayView< GO > &CRS_colind, const Teuchos::ArrayView< const int > &SourcePids, Teuchos::Array< int > &TargetPids)
unpackAndCombineIntoCrsArrays
Impl::CreateMirrorViewFromUnmanagedHostArray< ValueType, OutputDeviceType >::output_view_type create_mirror_view_from_raw_host_array(const OutputDeviceType &, ValueType *inPtr, const size_t inSize, const bool copy=true, const char label[]="")
Variant of Kokkos::create_mirror_view that takes a raw host 1-d array as input.
size_t unpackAndCombineWithOwningPIDsCount(const CrsGraph< LO, GO, NT > &sourceGraph, const Teuchos::ArrayView< const LO > &importLIDs, const Teuchos::ArrayView< const typename CrsGraph< LO, GO, NT >::packet_type > &imports, const Teuchos::ArrayView< const size_t > &numPacketsPerLID, size_t constantNumPackets, CombineMode combineMode, size_t numSameIDs, const Teuchos::ArrayView< const LO > &permuteToLIDs, const Teuchos::ArrayView< const LO > &permuteFromLIDs)
Special version of Tpetra::Details::unpackCrsGraphAndCombine that also unpacks owning process ranks.
void unpackCrsMatrixAndCombine(const CrsMatrix< ST, LO, GO, NT > &sourceMatrix, const Teuchos::ArrayView< const char > &imports, const Teuchos::ArrayView< const size_t > &numPacketsPerLID, const Teuchos::ArrayView< const LO > &importLIDs, size_t constantNumPackets, CombineMode combineMode)
Unpack the imported column indices and values, and combine into matrix.
OffsetsViewType::non_const_value_type computeOffsetsFromCounts(const ExecutionSpace &execSpace, const OffsetsViewType &ptr, const CountsViewType &counts)
Compute offsets from counts.
Namespace Tpetra contains the class and methods constituting the Tpetra library.
void deep_copy(MultiVector< DS, DL, DG, DN > &dst, const MultiVector< SS, SL, SG, SN > &src)
Copy the contents of the MultiVector src into dst.
CombineMode
Rule for combining data in an Import or Export.
@ REPLACE
Replace existing values with new values.
@ ABSMAX
Replace old value with maximum of magnitudes of old and new values.
@ INSERT
Insert new values that don't currently exist.
Traits class for packing / unpacking data of type T.
static KOKKOS_INLINE_FUNCTION Kokkos::pair< int, size_t > unpackArray(value_type outBuf[], const char inBuf[], const size_t numEnt)
Unpack numEnt value_type entries from the given input buffer of bytes, to the given output buffer of ...
static KOKKOS_INLINE_FUNCTION size_t unpackValue(T &outVal, const char inBuf[])
Unpack the given value from the given output buffer.
Kokkos::View< value_type *, Kokkos::AnonymousSpace > output_array_type
The type of an output array of value_type.
static const bool compileTimeSize
Whether the number of bytes required to pack one instance of value_type is fixed at compile time.
static KOKKOS_INLINE_FUNCTION size_t packValueCount(const T &)
Number of bytes required to pack or unpack the given value of type value_type.
Kokkos::View< const value_type *, Kokkos::AnonymousSpace > input_array_type
The type of an input array of value_type.
Unpacks and combines a single row of the CrsMatrix.
int error() const
Host function for getting the error.