#include <Panzer_STK_Interface.hpp>

Classes
struct	EdgeBlockException

struct	ElementBlockException

struct	FaceBlockException

class	LocalIdCompare

struct	SidesetException

Public Types
typedef double	ProcIdData

typedef stk::mesh::Field< double >	SolutionFieldType

typedef stk::mesh::Field< double >	VectorFieldType

typedef stk::mesh::Field< ProcIdData >	ProcIdFieldType

Public Member Functions
	STK_Interface ()
	Construct with no spatial dimension set. addElementBlock() and initialize() must be used to set it up before use.

	STK_Interface (unsigned dim)

	STK_Interface (Teuchos::RCP< stk::mesh::MetaData > metaData)
	Construct from an already-built STK meta data object.

void	addElementBlock (const std::string &name, const CellTopologyData *ctData)

void	addEdgeBlock (const std::string &elemBlockName, const std::string &edgeBlockName, const stk::topology &topology)

void	addEdgeBlock (const std::string &elemBlockName, const std::string &edgeBlockName, const CellTopologyData *ctData)

void	addFaceBlock (const std::string &elemBlockName, const std::string &faceBlockName, const stk::topology &topology)

void	addFaceBlock (const std::string &elemBlockName, const std::string &faceBlockName, const CellTopologyData *ctData)

void	addSideset (const std::string &name, const CellTopologyData *ctData)

void	addNodeset (const std::string &name)

void	addSolutionField (const std::string &fieldName, const std::string &blockId)

void	addCellField (const std::string &fieldName, const std::string &blockId)

void	addEdgeField (const std::string &fieldName, const std::string &blockId)

void	addFaceField (const std::string &fieldName, const std::string &blockId)

void	addMeshCoordFields (const std::string &blockId, const std::vector< std::string > &coordField, const std::string &dispPrefix)

void	addInformationRecords (const std::vector< std::string > &info_records)

void	initialize (stk::ParallelMachine parallelMach, bool setupIO=true, const bool buildRefinementSupport=false)

void	instantiateBulkData (stk::ParallelMachine parallelMach)

void	beginModification ()

void	endModification (const bool find_and_set_shared_nodes_in_stk=true)

void	addNode (stk::mesh::EntityId gid, const std::vector< double > &coord)

void	addElement (const Teuchos::RCP< ElementDescriptor > &ed, stk::mesh::Part *block)
	Adds an element (described by its global ID and node IDs) into the given element block part.

void	addEdges ()
	Builds edge entities for the mesh from its existing elements.

void	addFaces ()
	Builds face entities for the mesh from its existing elements.

void	addEntityToSideset (stk::mesh::Entity entity, stk::mesh::Part *sideset)

void	addEntityToNodeset (stk::mesh::Entity entity, stk::mesh::Part *nodeset)

void	addEntityToEdgeBlock (stk::mesh::Entity entity, stk::mesh::Part *edgeblock)

void	addEntitiesToEdgeBlock (std::vector< stk::mesh::Entity > entities, stk::mesh::Part *edgeblock)

void	addEntityToFaceBlock (stk::mesh::Entity entity, stk::mesh::Part *faceblock)

void	addEntitiesToFaceBlock (std::vector< stk::mesh::Entity > entities, stk::mesh::Part *faceblock)

const VectorFieldType &	getCoordinatesField () const

const VectorFieldType &	getEdgesField () const

const VectorFieldType &	getFacesField () const

const double *	getNodeCoordinates (stk::mesh::EntityId nodeId) const

const double *	getNodeCoordinates (stk::mesh::Entity node) const

void	getSubcellIndices (unsigned entityRank, stk::mesh::EntityId elementId, std::vector< stk::mesh::EntityId > &subcellIds) const

void	getMyElements (std::vector< stk::mesh::Entity > &elements) const

void	getMyElements (const std::string &blockID, std::vector< stk::mesh::Entity > &elements) const

void	getNeighborElements (std::vector< stk::mesh::Entity > &elements) const

void	getNeighborElements (const std::string &blockID, std::vector< stk::mesh::Entity > &elements) const

void	getMyEdges (std::vector< stk::mesh::Entity > &edges) const

void	getMyEdges (const std::string &edgeBlockName, std::vector< stk::mesh::Entity > &edges) const

void	getMyEdges (const std::string &edgeBlockName, const std::string &blockName, std::vector< stk::mesh::Entity > &edges) const

void	getAllEdges (const std::string &edgeBlockName, std::vector< stk::mesh::Entity > &edges) const

void	getAllEdges (const std::string &edgeBlockName, const std::string &blockName, std::vector< stk::mesh::Entity > &edges) const

void	getMyFaces (std::vector< stk::mesh::Entity > &faces) const

void	getMyFaces (const std::string &faceBlockName, std::vector< stk::mesh::Entity > &faces) const

void	getMyFaces (const std::string &faceBlockName, const std::string &blockName, std::vector< stk::mesh::Entity > &faces) const

void	getAllFaces (const std::string &faceBlockName, std::vector< stk::mesh::Entity > &faces) const

void	getAllFaces (const std::string &faceBlockName, const std::string &blockName, std::vector< stk::mesh::Entity > &faces) const

void	getMySides (const std::string &sideName, std::vector< stk::mesh::Entity > &sides) const

void	getMySides (const std::string &sideName, const std::string &blockName, std::vector< stk::mesh::Entity > &sides) const

void	getAllSides (const std::string &sideName, std::vector< stk::mesh::Entity > &sides) const

void	getAllSides (const std::string &sideName, const std::string &blockName, std::vector< stk::mesh::Entity > &sides) const

void	getMyNodes (const std::string &sideName, const std::string &blockName, std::vector< stk::mesh::Entity > &nodes) const

stk::mesh::Entity	findConnectivityById (stk::mesh::Entity src, stk::mesh::EntityRank tgt_rank, unsigned rel_id) const

void	writeToExodus (const std::string &filename, const bool append=false)
	Write this mesh and associated fields to the given output file.

void	setupExodusFile (const std::string &filename, const bool append=false, const bool append_after_restart_time=false, const double restart_time=0.0)
	Set up an output Exodus file for writing results.

void	setupExodusFile (const std::string &filename, const std::vector< Ioss::Property > &ioss_properties, const bool append=false, const bool append_after_restart_time=false, const double restart_time=0.0)
	Set up an output Exodus file for writing results.

void	writeToExodus (double timestep)
	Write this mesh and associated fields at the given `timestep`.

void	addGlobalToExodus (const std::string &key, const int &value)
	Add an `int` global variable to the information to be written to the Exodus output file.

void	addGlobalToExodus (const std::string &key, const double &value)
	Add a `double` global variable to the information to be written to the Exodus output file.

void	addGlobalToExodus (const std::string &key, const std::vector< int > &value)
	Add a `std::vector<int>` global variable to the information to be written to the Exodus output file.

void	addGlobalToExodus (const std::string &key, const std::vector< double > &value)
	Add a `std::vector<double>` global variable to the information to be written to the Exodus output file.

Teuchos::RCP< const Teuchos::Comm< int > >	getComm () const
	get the comm associated with this mesh

Teuchos::RCP< stk::mesh::BulkData >	getBulkData () const
	Returns the underlying STK bulk data object.

Teuchos::RCP< stk::mesh::MetaData >	getMetaData () const
	Returns the underlying STK meta data object.

bool	isWritable () const
	Returns true if the mesh can be written out to Exodus (i.e. is IOSS/output set up)?

bool	isModifiable () const
	Returns true if the bulk data manager is currently in modification mode (i.e. between beginModification() and endModification())

unsigned	getDimension () const
	get the dimension

std::size_t	getNumElementBlocks () const
	get the block count

void	getElementBlockNames (std::vector< std::string > &names) const

void	getSidesetNames (std::vector< std::string > &name) const

void	getNodesetNames (std::vector< std::string > &name) const

void	getEdgeBlockNames (std::vector< std::string > &names) const

void	getFaceBlockNames (std::vector< std::string > &names) const

stk::mesh::Part *	getOwnedPart () const
	Get a pointer to the locally owned part.

stk::mesh::Part *	getElementBlockPart (const std::string &name) const
	get the block part

stk::mesh::Part *	getEdgeBlock (const std::string &name) const
	get the block part

stk::mesh::Part *	getFaceBlock (const std::string &name) const
	get the block part

std::size_t	getNumSidesets () const
	get the side set count

stk::mesh::Part *	getSideset (const std::string &name) const

std::size_t	getNumNodesets () const
	get the side set count

stk::mesh::Part *	getNodeset (const std::string &name) const

std::size_t	getEntityCounts (unsigned entityRank) const
	get the global counts for the entity of specified rank

stk::mesh::EntityId	getMaxEntityId (unsigned entityRank) const
	get max entity ID of type entityRank

void	getElementsSharingNode (stk::mesh::EntityId nodeId, std::vector< stk::mesh::Entity > &elements) const
	get a set of elements sharing a single node

void	getNodeIdsForElement (stk::mesh::Entity element, std::vector< stk::mesh::EntityId > &nodeIds) const
	get a list of node ids for nodes connected to an element

void	getOwnedElementsSharingNode (stk::mesh::Entity node, std::vector< stk::mesh::Entity > &elements, std::vector< int > &relIds) const

void	getOwnedElementsSharingNode (stk::mesh::EntityId nodeId, std::vector< stk::mesh::Entity > &elements, std::vector< int > &relIds, unsigned int matchType) const

void	getElementsSharingNodes (const std::vector< stk::mesh::EntityId > nodeId, std::vector< stk::mesh::Entity > &elements) const
	get a set of elements sharing multiple nodes

void	buildSubcells ()
	force the mesh to build subcells: edges and faces

std::size_t	elementLocalId (stk::mesh::Entity elmt) const

std::size_t	elementLocalId (stk::mesh::EntityId gid) const

stk::mesh::EntityId	elementGlobalId (std::size_t lid) const

stk::mesh::EntityId	elementGlobalId (stk::mesh::Entity elmt) const

bool	isEdgeLocal (stk::mesh::Entity edge) const

bool	isEdgeLocal (stk::mesh::EntityId gid) const

std::size_t	edgeLocalId (stk::mesh::Entity elmt) const

std::size_t	edgeLocalId (stk::mesh::EntityId gid) const

stk::mesh::EntityId	edgeGlobalId (std::size_t lid) const

stk::mesh::EntityId	edgeGlobalId (stk::mesh::Entity edge) const

bool	isFaceLocal (stk::mesh::Entity face) const

bool	isFaceLocal (stk::mesh::EntityId gid) const

std::size_t	faceLocalId (stk::mesh::Entity elmt) const

std::size_t	faceLocalId (stk::mesh::EntityId gid) const

stk::mesh::EntityId	faceGlobalId (std::size_t lid) const

stk::mesh::EntityId	faceGlobalId (stk::mesh::Entity face) const

unsigned	entityOwnerRank (stk::mesh::Entity entity) const

bool	isValid (stk::mesh::Entity entity) const

std::string	containingBlockId (stk::mesh::Entity elmt) const

stk::mesh::Field< double > *	getSolutionField (const std::string &fieldName, const std::string &blockId) const

stk::mesh::Field< double > *	getCellField (const std::string &fieldName, const std::string &blockId) const

stk::mesh::Field< double > *	getEdgeField (const std::string &fieldName, const std::string &blockId) const

stk::mesh::Field< double > *	getFaceField (const std::string &fieldName, const std::string &blockId) const

ProcIdFieldType *	getProcessorIdField ()
	Get the field holding each entity's owning processor rank.

bool	isInitialized () const
	Returns true if `initialize` been called on this mesh object.

Teuchos::RCP< const std::vector< stk::mesh::Entity > >	getElementsOrderedByLID () const

template<typename ArrayT >
void	setSolutionFieldData (const std::string &fieldName, const std::string &blockId, const std::vector< std::size_t > &localElementIds, const ArrayT &solutionValues, double scaleValue=1.0)

template<typename ArrayT >
void	getSolutionFieldData (const std::string &fieldName, const std::string &blockId, const std::vector< std::size_t > &localElementIds, ArrayT &solutionValues) const

template<typename ArrayT >
void	setCellFieldData (const std::string &fieldName, const std::string &blockId, const std::vector< std::size_t > &localElementIds, const ArrayT &solutionValues, double scaleValue=1.0)

Teuchos::RCP< const std::vector< stk::mesh::Entity > >	getEdgesOrderedByLID () const

Teuchos::RCP< const std::vector< stk::mesh::Entity > >	getFacesOrderedByLID () const

template<typename ArrayT >
void	setEdgeFieldData (const std::string &fieldName, const std::string &blockId, const std::vector< std::size_t > &localEdgeIds, const ArrayT &edgeValues, double scaleValue=1.0)

template<typename ArrayT >
void	setFaceFieldData (const std::string &fieldName, const std::string &blockId, const std::vector< std::size_t > &localFaceIds, const ArrayT &faceValues, double scaleValue=1.0)

template<typename ArrayT >
void	getElementVertices (const std::vector< std::size_t > &localIds, ArrayT &vertices) const

template<typename ArrayT >
void	getElementVertices (const std::vector< stk::mesh::Entity > &elements, ArrayT &vertices) const

template<typename ArrayT >
void	getElementVertices (const std::vector< std::size_t > &localIds, const std::string &eBlock, ArrayT &vertices) const

template<typename ArrayT >
void	getElementVertices (const std::vector< stk::mesh::Entity > &elements, const std::string &eBlock, ArrayT &vertices) const

template<typename ArrayT >
void	getElementVerticesNoResize (const std::vector< std::size_t > &localIds, ArrayT &vertices) const

template<typename ArrayT >
void	getElementVerticesNoResize (const std::vector< stk::mesh::Entity > &elements, ArrayT &vertices) const

template<typename ArrayT >
void	getElementVerticesNoResize (const std::vector< std::size_t > &localIds, const std::string &eBlock, ArrayT &vertices) const

template<typename ArrayT >
void	getElementVerticesNoResize (const std::vector< stk::mesh::Entity > &elements, const std::string &eBlock, ArrayT &vertices) const

template<typename ArrayT >
void	getElementNodes (const std::vector< std::size_t > &localIds, ArrayT &nodes) const

template<typename ArrayT >
void	getElementNodes (const std::vector< stk::mesh::Entity > &elements, ArrayT &nodes) const

template<typename ArrayT >
void	getElementNodes (const std::vector< std::size_t > &localIds, const std::string &eBlock, ArrayT &nodes) const

template<typename ArrayT >
void	getElementNodes (const std::vector< stk::mesh::Entity > &elements, const std::string &eBlock, ArrayT &nodes) const

template<typename ArrayT >
void	getElementNodesNoResize (const std::vector< std::size_t > &localIds, ArrayT &nodes) const

template<typename ArrayT >
void	getElementNodesNoResize (const std::vector< stk::mesh::Entity > &elements, ArrayT &nodes) const

template<typename ArrayT >
void	getElementNodesNoResize (const std::vector< std::size_t > &localIds, const std::string &eBlock, ArrayT &nodes) const

template<typename ArrayT >
void	getElementNodesNoResize (const std::vector< stk::mesh::Entity > &elements, const std::string &eBlock, ArrayT &nodes) const

stk::mesh::EntityRank	getElementRank () const
	Get the STK entity rank corresponding to elements.

stk::mesh::EntityRank	getSideRank () const
	Get the STK entity rank corresponding to sides (dimension one lower than element rank).

stk::mesh::EntityRank	getFaceRank () const
	Get the STK entity rank corresponding to faces.

stk::mesh::EntityRank	getEdgeRank () const
	Get the STK entity rank corresponding to edges.

stk::mesh::EntityRank	getNodeRank () const
	Get the STK entity rank corresponding to nodes.

void	initializeFromMetaData ()

void	buildLocalElementIDs ()

void	buildLocalEdgeIDs ()

void	buildLocalFaceIDs ()

const std::vector< Teuchos::RCP< const PeriodicBC_MatcherBase > > &	getPeriodicBCVector () const

std::vector< Teuchos::RCP< const PeriodicBC_MatcherBase > > &	getPeriodicBCVector ()

const bool &	useBoundingBoxSearch () const

void	setBoundingBoxSearchFlag (const bool &searchFlag)

void	addPeriodicBC (const Teuchos::RCP< const PeriodicBC_MatcherBase > &bc)

void	addPeriodicBCs (const std::vector< Teuchos::RCP< const PeriodicBC_MatcherBase > > &bc_vec)

std::pair< Teuchos::RCP< std::vector< std::pair< std::size_t, std::size_t > > >, Teuchos::RCP< std::vector< unsigned int > > >	getPeriodicNodePairing () const

bool	validBlockId (const std::string &blockId) const

void	print (std::ostream &os) const

void	printMetaData (std::ostream &os) const

Teuchos::RCP< const shards::CellTopology >	getCellTopology (const std::string &eBlock) const

double	getCurrentStateTime () const

double	getInitialStateTime () const

void	setInitialStateTime (double value)

void	rebalance (const Teuchos::ParameterList &params)

void	setBlockWeight (const std::string &blockId, double weight)

void	setUseFieldCoordinates (bool useFieldCoordinates)

bool	getUseFieldCoordinates () const

void	setUseLowerCaseForIO (bool useLowerCase)

bool	getUseLowerCaseForIO () const

template<typename ArrayT >
void	getElementVertices_FromField (const std::vector< stk::mesh::Entity > &elements, const std::string &eBlock, ArrayT &vertices) const

template<typename ArrayT >
void	getElementVertices_FromFieldNoResize (const std::vector< stk::mesh::Entity > &elements, const std::string &eBlock, ArrayT &vertices) const
	but the vertex array will not be resized.

template<typename ArrayT >
void	getElementVertices_FromCoords (const std::vector< stk::mesh::Entity > &elements, ArrayT &vertices) const

template<typename ArrayT >
void	getElementVertices_FromCoordsNoResize (const std::vector< stk::mesh::Entity > &elements, ArrayT &vertices) const
	but the vertex array will not be resized.

template<typename ArrayT >
void	getElementNodes_FromField (const std::vector< stk::mesh::Entity > &elements, const std::string &eBlock, ArrayT &nodes) const

template<typename ArrayT >
void	getElementNodes_FromFieldNoResize (const std::vector< stk::mesh::Entity > &elements, const std::string &eBlock, ArrayT &nodes) const
	but the node array will not be resized.

template<typename ArrayT >
void	getElementNodes_FromCoords (const std::vector< stk::mesh::Entity > &elements, ArrayT &nodes) const

template<typename ArrayT >
void	getElementNodes_FromCoordsNoResize (const std::vector< stk::mesh::Entity > &elements, ArrayT &nodes) const
	but the node array will not be resized.

void	refineMesh (const int numberOfLevels, const bool deleteParentElements)

Static Public Attributes
static const std::string	coordsString = "coordinates"

static const std::string	nodesString = "nodes"

static const std::string	edgesString = "edges"

static const std::string	edgeBlockString = "edge_block"

static const std::string	faceBlockString = "face_block"

static const std::string	facesString = "faces"

Protected Member Functions
void	buildEntityCounts ()

void	buildMaxEntityIds ()

void	initializeFieldsInSTK (const std::map< std::pair< std::string, std::string >, SolutionFieldType * > &nameToField, bool setupIO)

Teuchos::RCP< Teuchos::MpiComm< int > >	getSafeCommunicator (stk::ParallelMachine parallelMach) const

void	applyElementLoadBalanceWeights ()

bool	isMeshCoordField (const std::string &eBlock, const std::string &fieldName, int &axis) const

template<typename ArrayT >
void	setDispFieldData (const std::string &fieldName, const std::string &blockId, int axis, const std::vector< std::size_t > &localElementIds, const ArrayT &solutionValues)

Protected Attributes
std::vector< Teuchos::RCP< const PeriodicBC_MatcherBase > >	periodicBCs_

bool	useBBoxSearch_ = true

Teuchos::RCP< stk::mesh::MetaData >	metaData_

Teuchos::RCP< stk::mesh::BulkData >	bulkData_

std::map< std::string, stk::mesh::Part * >	elementBlocks_

std::map< std::string, stk::mesh::Part * >	sidesets_

std::map< std::string, stk::mesh::Part * >	nodesets_

std::map< std::string, stk::mesh::Part * >	edgeBlocks_

std::map< std::string, stk::mesh::Part * >	faceBlocks_

std::map< std::string, Teuchos::RCP< shards::CellTopology > >	elementBlockCT_

stk::mesh::Part *	nodesPart_

std::vector< stk::mesh::Part * >	nodesPartVec_

stk::mesh::Part *	edgesPart_

std::vector< stk::mesh::Part * >	edgesPartVec_

stk::mesh::Part *	facesPart_

std::vector< stk::mesh::Part * >	facesPartVec_

VectorFieldType *	coordinatesField_

VectorFieldType *	edgesField_

VectorFieldType *	facesField_

ProcIdFieldType *	processorIdField_

SolutionFieldType *	loadBalField_

std::map< std::pair< std::string, std::string >, SolutionFieldType * >	fieldNameToSolution_

std::map< std::pair< std::string, std::string >, SolutionFieldType * >	fieldNameToCellField_

std::map< std::pair< std::string, std::string >, SolutionFieldType * >	fieldNameToEdgeField_

std::map< std::pair< std::string, std::string >, SolutionFieldType * >	fieldNameToFaceField_

std::set< std::string >	informationRecords_

unsigned	dimension_

bool	initialized_

std::vector< std::size_t >	entityCounts_

std::vector< stk::mesh::EntityId >	maxEntityId_

unsigned	procRank_

std::size_t	currentLocalId_

Teuchos::RCP< Teuchos::MpiComm< int > >	mpiComm_

double	initialStateTime_

double	currentStateTime_

Teuchos::RCP< std::vector< stk::mesh::Entity > >	orderedElementVector_

Teuchos::RCP< std::vector< stk::mesh::Entity > >	orderedEdgeVector_

Teuchos::RCP< std::vector< stk::mesh::Entity > >	orderedFaceVector_

std::map< std::string, double >	blockWeights_

std::unordered_map< stk::mesh::EntityId, std::size_t >	localIDHash_

std::unordered_map< stk::mesh::EntityId, std::size_t >	localEdgeIDHash_

std::unordered_map< stk::mesh::EntityId, std::size_t >	localFaceIDHash_

std::map< std::string, std::vector< std::string > >	meshCoordFields_

std::map< std::string, std::vector< std::string > >	meshDispFields_

bool	useFieldCoordinates_

bool	useLowerCase_

Detailed Description

Definition at line 73 of file Panzer_STK_Interface.hpp.

Member Typedef Documentation

◆ ProcIdData

typedef double panzer_stk::STK_Interface::ProcIdData

Definition at line 75 of file Panzer_STK_Interface.hpp.

◆ SolutionFieldType

typedef stk::mesh::Field<double> panzer_stk::STK_Interface::SolutionFieldType

Definition at line 76 of file Panzer_STK_Interface.hpp.

◆ VectorFieldType

typedef stk::mesh::Field<double> panzer_stk::STK_Interface::VectorFieldType

Definition at line 77 of file Panzer_STK_Interface.hpp.

◆ ProcIdFieldType

typedef stk::mesh::Field<ProcIdData> panzer_stk::STK_Interface::ProcIdFieldType

Definition at line 78 of file Panzer_STK_Interface.hpp.

Constructor & Destructor Documentation

◆ STK_Interface() [1/3]

panzer_stk::STK_Interface::STK_Interface ( )

Construct with no spatial dimension set. addElementBlock() and initialize() must be used to set it up before use.

Definition at line 77 of file Panzer_STK_Interface.cpp.

◆ STK_Interface() [2/3]

panzer_stk::STK_Interface::STK_Interface ( unsigned dim )

Default constructor

Definition at line 91 of file Panzer_STK_Interface.cpp.

◆ STK_Interface() [3/3]

panzer_stk::STK_Interface::STK_Interface ( Teuchos::RCP< stk::mesh::MetaData > metaData )

Construct from an already-built STK meta data object.

Definition at line 84 of file Panzer_STK_Interface.cpp.

Member Function Documentation

◆ addElementBlock()

void panzer_stk::STK_Interface::addElementBlock	(	const std::string &	name,
		const CellTopologyData *	ctData
	)

Add an element block with a string name

Definition at line 1567 of file Panzer_STK_Interface.cpp.

◆ addEdgeBlock() [1/2]

void panzer_stk::STK_Interface::addEdgeBlock	(	const std::string &	elemBlockName,
		const std::string &	edgeBlockName,
		const stk::topology &	topology
	)

Add an edge block with a string name

Definition at line 1598 of file Panzer_STK_Interface.cpp.

◆ addEdgeBlock() [2/2]

void panzer_stk::STK_Interface::addEdgeBlock	(	const std::string &	elemBlockName,
		const std::string &	edgeBlockName,
		const CellTopologyData *	ctData
	)

Definition at line 1619 of file Panzer_STK_Interface.cpp.

◆ addFaceBlock() [1/2]

void panzer_stk::STK_Interface::addFaceBlock	(	const std::string &	elemBlockName,
		const std::string &	faceBlockName,
		const stk::topology &	topology
	)

Add a face block with a string name

Definition at line 1643 of file Panzer_STK_Interface.cpp.

◆ addFaceBlock() [2/2]

void panzer_stk::STK_Interface::addFaceBlock	(	const std::string &	elemBlockName,
		const std::string &	faceBlockName,
		const CellTopologyData *	ctData
	)

Definition at line 1664 of file Panzer_STK_Interface.cpp.

◆ addSideset()

void panzer_stk::STK_Interface::addSideset	(	const std::string &	name,
		const CellTopologyData *	ctData
	)

Add a side set with a string name

Definition at line 103 of file Panzer_STK_Interface.cpp.

◆ addNodeset()

void panzer_stk::STK_Interface::addNodeset ( const std::string & name )

Add a node set with a string name

Definition at line 115 of file Panzer_STK_Interface.cpp.

◆ addSolutionField()

void panzer_stk::STK_Interface::addSolutionField	(	const std::string &	fieldName,
		const std::string &	blockId
	)

Add a solution field

Definition at line 129 of file Panzer_STK_Interface.cpp.

◆ addCellField()

void panzer_stk::STK_Interface::addCellField	(	const std::string &	fieldName,
		const std::string &	blockId
	)

Add a solution field

Definition at line 148 of file Panzer_STK_Interface.cpp.

◆ addEdgeField()

void panzer_stk::STK_Interface::addEdgeField	(	const std::string &	fieldName,
		const std::string &	blockId
	)

Add an edge field

Definition at line 168 of file Panzer_STK_Interface.cpp.

◆ addFaceField()

void panzer_stk::STK_Interface::addFaceField	(	const std::string &	fieldName,
		const std::string &	blockId
	)

Add a face field

Definition at line 189 of file Panzer_STK_Interface.cpp.

◆ addMeshCoordFields()

void panzer_stk::STK_Interface::addMeshCoordFields	(	const std::string &	blockId,
		const std::vector< std::string > &	coordField,
		const std::string &	dispPrefix
	)

Add a solution field for coordinates with a particular prefix, force it to be outputed as a to be mesh displacement field. This is really only relevant for I/O and how the field is stored internally in the mesh.

Parameters

[in]	blockId	Element block to use
[in]	coordPrefix	Prefix for solution coordinate field (assumes using "X","Y","Z" as postfix)
[in]	dispPrefix	Prefix for displacment (output) field

Definition at line 210 of file Panzer_STK_Interface.cpp.

◆ addInformationRecords()

void panzer_stk::STK_Interface::addInformationRecords ( const std::vector< std::string > & info_records )

Add a vector of strings to the Information Records block. Each string will be it's own record. The info records will be deduped before they are added to IOSS.

Definition at line 254 of file Panzer_STK_Interface.cpp.

◆ initialize()

void panzer_stk::STK_Interface::initialize	(	stk::ParallelMachine	parallelMach,
		bool	setupIO = `true`,
		const bool	buildRefinementSupport = `false`
	)

Initialize the mesh with the current dimension This also calls commit on the meta data causing it to be frozen. Information about elements blocks has to be commited before this. If parallel machine has already been specified through instantiateBulkData that communicator is used. Otherwise a new copy is constructed and will be used through out this mesh object's lifetime.

Parameters

[in]	parallelMach	Communicator
[in]	setupIO	If set to true and IOSS is enabled, the output mesh will be initialized.
[in]	buildRefinementSupport	If true, build percept uniform refinement objects.

Definition at line 259 of file Panzer_STK_Interface.cpp.

◆ instantiateBulkData()

void panzer_stk::STK_Interface::instantiateBulkData ( stk::ParallelMachine parallelMach )

Build a bulk data object but don't do anything with it. If parallel machine has already been specified through initialize that communicator is used. Otherwise a new copy is constructed and will be used by default throughout the lifetime of this object.

Definition at line 391 of file Panzer_STK_Interface.cpp.

◆ beginModification()

void panzer_stk::STK_Interface::beginModification ( )

Put the bulk data manager in modification mode.

Definition at line 401 of file Panzer_STK_Interface.cpp.

◆ endModification()

void panzer_stk::STK_Interface::endModification ( const bool find_and_set_shared_nodes_in_stk = true )

Take the bulk data manager out of modification mode.

Parameters

find_and_set_shared_nodes_in_stk (bool) If set to true, this performs a geometric search to figure out which nodes are shared entities and marks them as shared in stk. This is very inefficient and communication intensive. Set this to false for exodus as the sharing is already known. Must be true for inline meshes. We should fix the inline mesh factories to mark sharing at node construction time to eliminate the need for searching for shared nodes. Defaults to true to maintain backwards compatibility.

Definition at line 409 of file Panzer_STK_Interface.cpp.

◆ addNode()

void panzer_stk::STK_Interface::addNode	(	stk::mesh::EntityId	gid,
		const std::vector< double > &	coord
	)

Add a node to the mesh with a specific set of coordinates to the mesh.

Precondition: coord.size()==getDimension(); isModifiable()==true

Definition at line 432 of file Panzer_STK_Interface.cpp.

◆ addElement()

void panzer_stk::STK_Interface::addElement	(	const Teuchos::RCP< ElementDescriptor > &	ed,
		stk::mesh::Part *	block
	)

Adds an element (described by its global ID and node IDs) into the given element block part.

Definition at line 500 of file Panzer_STK_Interface.cpp.

◆ addEdges()

void panzer_stk::STK_Interface::addEdges ( )

Builds edge entities for the mesh from its existing elements.

Definition at line 523 of file Panzer_STK_Interface.cpp.

◆ addFaces()

void panzer_stk::STK_Interface::addFaces ( )

Builds face entities for the mesh from its existing elements.

Definition at line 551 of file Panzer_STK_Interface.cpp.

◆ addEntityToSideset()

void panzer_stk::STK_Interface::addEntityToSideset	(	stk::mesh::Entity	entity,
		stk::mesh::Part *	sideset
	)

Adds an entity to a specified side set.

Definition at line 450 of file Panzer_STK_Interface.cpp.

◆ addEntityToNodeset()

void panzer_stk::STK_Interface::addEntityToNodeset	(	stk::mesh::Entity	entity,
		stk::mesh::Part *	nodeset
	)

Adds an entity to a specified node set.

Definition at line 458 of file Panzer_STK_Interface.cpp.

◆ addEntityToEdgeBlock()

void panzer_stk::STK_Interface::addEntityToEdgeBlock	(	stk::mesh::Entity	entity,
		stk::mesh::Part *	edgeblock
	)

Adds an entity to a specified edge block.

Definition at line 466 of file Panzer_STK_Interface.cpp.

◆ addEntitiesToEdgeBlock()

void panzer_stk::STK_Interface::addEntitiesToEdgeBlock	(	std::vector< stk::mesh::Entity >	entities,
		stk::mesh::Part *	edgeblock
	)

Adds a vector of entities to a specified edge block.

Definition at line 473 of file Panzer_STK_Interface.cpp.

◆ addEntityToFaceBlock()

void panzer_stk::STK_Interface::addEntityToFaceBlock	(	stk::mesh::Entity	entity,
		stk::mesh::Part *	faceblock
	)

Adds an entity to a specified face block.

Definition at line 483 of file Panzer_STK_Interface.cpp.

◆ addEntitiesToFaceBlock()

void panzer_stk::STK_Interface::addEntitiesToFaceBlock	(	std::vector< stk::mesh::Entity >	entities,
		stk::mesh::Part *	faceblock
	)

Adds a vector of entities to a specified face block.

Definition at line 490 of file Panzer_STK_Interface.cpp.

◆ getCoordinatesField()

const VectorFieldType & panzer_stk::STK_Interface::getCoordinatesField ( ) const

inline

Grab the coordinates field

Definition at line 258 of file Panzer_STK_Interface.hpp.

◆ getEdgesField()

const VectorFieldType & panzer_stk::STK_Interface::getEdgesField ( ) const

inline

Grab the edges field

Definition at line 263 of file Panzer_STK_Interface.hpp.

◆ getFacesField()

const VectorFieldType & panzer_stk::STK_Interface::getFacesField ( ) const

inline

Return the faces field

Definition at line 267 of file Panzer_STK_Interface.hpp.

◆ getNodeCoordinates() [1/2]

const double * panzer_stk::STK_Interface::getNodeCoordinates ( stk::mesh::EntityId nodeId ) const

Look up a global node and get the coordinate.

Definition at line 1071 of file Panzer_STK_Interface.cpp.

◆ getNodeCoordinates() [2/2]

const double * panzer_stk::STK_Interface::getNodeCoordinates ( stk::mesh::Entity node ) const

Look up a global node and get the coordinate.

Definition at line 1077 of file Panzer_STK_Interface.cpp.

◆ getSubcellIndices()

void panzer_stk::STK_Interface::getSubcellIndices	(	unsigned	entityRank,
		stk::mesh::EntityId	elementId,
		std::vector< stk::mesh::EntityId > &	subcellIds
	)		const

Get subcell global IDs

Parameters

[in]	entityRank	rank of the subcells to look up (e.g. node, edge, face).
[in]	elementId	global ID of the element whose subcells to look up.
[out]	subcellIds	populated with the global IDs of the element's subcells of the given rank.

Definition at line 1082 of file Panzer_STK_Interface.cpp.

◆ getMyElements() [1/2]

void panzer_stk::STK_Interface::getMyElements ( std::vector< stk::mesh::Entity > & elements ) const

Get a vector of elements owned by this processor

Definition at line 1103 of file Panzer_STK_Interface.cpp.

◆ getMyElements() [2/2]

void panzer_stk::STK_Interface::getMyElements	(	const std::string &	blockID,
		std::vector< stk::mesh::Entity > &	elements
	)		const

Get a vector of elements owned by this processor on a particular block ID

Definition at line 1113 of file Panzer_STK_Interface.cpp.

◆ getNeighborElements() [1/2]

void panzer_stk::STK_Interface::getNeighborElements ( std::vector< stk::mesh::Entity > & elements ) const

Get a vector of elements that share an edge/face with an owned element. Note that these elements are not owned.

Definition at line 1128 of file Panzer_STK_Interface.cpp.

◆ getNeighborElements() [2/2]

void panzer_stk::STK_Interface::getNeighborElements	(	const std::string &	blockID,
		std::vector< stk::mesh::Entity > &	elements
	)		const

Get a vector of elements not owned by this processor but in a particular block

Definition at line 1138 of file Panzer_STK_Interface.cpp.

◆ getMyEdges() [1/3]

void panzer_stk::STK_Interface::getMyEdges ( std::vector< stk::mesh::Entity > & edges ) const

Get a vector of edges owned by this processor

Definition at line 1152 of file Panzer_STK_Interface.cpp.

◆ getMyEdges() [2/3]

void panzer_stk::STK_Interface::getMyEdges	(	const std::string &	edgeBlockName,
		std::vector< stk::mesh::Entity > &	edges
	)		const

Get Entities corresponding to the edge block requested. The Entites in the vector should be a dimension lower than getDimension().

Parameters

[in]	edgeBlockName	Name of edge block
[in,out]	edges	Vector of entities containing the requested edges.

Definition at line 1161 of file Panzer_STK_Interface.cpp.

◆ getMyEdges() [3/3]

void panzer_stk::STK_Interface::getMyEdges	(	const std::string &	edgeBlockName,
		const std::string &	blockName,
		std::vector< stk::mesh::Entity > &	edges
	)		const

Get Entities corresponding to the locally owned part of the edge block requested. This also limits the entities to be in a particular element block. The Entites in the vector should be a dimension lower than getDimension().

Parameters

[in]	edgeBlockName	Name of edge block
[in]	blockName	Name of block
[in,out]	edges	Vector of entities containing the requested edges.

Definition at line 1174 of file Panzer_STK_Interface.cpp.

◆ getAllEdges() [1/2]

void panzer_stk::STK_Interface::getAllEdges	(	const std::string &	edgeBlockName,
		std::vector< stk::mesh::Entity > &	edges
	)		const

Get Entities corresponding to the locally owned part of the edge block requested. The Entites in the vector should be a dimension lower than getDimension().

Parameters

[in]	edgeBlockName	Name of edge block
[in,out]	edges	Vector of entities containing the requested edges.

Definition at line 1191 of file Panzer_STK_Interface.cpp.

◆ getAllEdges() [2/2]

void panzer_stk::STK_Interface::getAllEdges	(	const std::string &	edgeBlockName,
		const std::string &	blockName,
		std::vector< stk::mesh::Entity > &	edges
	)		const

Get Entities corresponding to the edge block requested. This also limits the entities to be in a particular element block. The Entites in the vector should be a dimension lower than getDimension().

Parameters

[in]	edgeBlockName	Name of edge block
[in]	blockName	Name of block
[in,out]	edges	Vector of entities containing the requested edges.

Definition at line 1203 of file Panzer_STK_Interface.cpp.

◆ getMyFaces() [1/3]

void panzer_stk::STK_Interface::getMyFaces ( std::vector< stk::mesh::Entity > & faces ) const

Get a vector of faces owned by this processor

Definition at line 1220 of file Panzer_STK_Interface.cpp.

◆ getMyFaces() [2/3]

void panzer_stk::STK_Interface::getMyFaces	(	const std::string &	faceBlockName,
		std::vector< stk::mesh::Entity > &	faces
	)		const

Get Entities corresponding to the face block requested. The Entites in the vector should be a dimension lower than getDimension().

Parameters

[in]	faceBlockName	Name of face block
[in,out]	faces	Vector of entities containing the requested faces.

Definition at line 1230 of file Panzer_STK_Interface.cpp.

◆ getMyFaces() [3/3]

void panzer_stk::STK_Interface::getMyFaces	(	const std::string &	faceBlockName,
		const std::string &	blockName,
		std::vector< stk::mesh::Entity > &	faces
	)		const

Get Entities corresponding to the locally owned part of the face block requested. This also limits the entities to be in a particular element block. The Entites in the vector should be a dimension lower than getDimension().

Parameters

[in]	faceBlockName	Name of face block
[in]	blockName	Name of block
[in,out]	faces	Vector of entities containing the requested faces.

Definition at line 1243 of file Panzer_STK_Interface.cpp.

◆ getAllFaces() [1/2]

void panzer_stk::STK_Interface::getAllFaces	(	const std::string &	faceBlockName,
		std::vector< stk::mesh::Entity > &	faces
	)		const

Get Entities corresponding to the locally owned part of the face block requested. The Entites in the vector should be a dimension lower than getDimension().

Parameters

[in]	faceBlockName	Name of face block
[in,out]	faces	Vector of entities containing the requested faces.

Definition at line 1260 of file Panzer_STK_Interface.cpp.

◆ getAllFaces() [2/2]

void panzer_stk::STK_Interface::getAllFaces	(	const std::string &	faceBlockName,
		const std::string &	blockName,
		std::vector< stk::mesh::Entity > &	faces
	)		const

Get Entities corresponding to the face block requested. This also limits the entities to be in a particular element block. The Entites in the vector should be a dimension lower than getDimension().

Parameters

[in]	faceBlockName	Name of face block
[in]	blockName	Name of block
[in,out]	faces	Vector of entities containing the requested faces.

Definition at line 1272 of file Panzer_STK_Interface.cpp.

◆ getMySides() [1/2]

void panzer_stk::STK_Interface::getMySides	(	const std::string &	sideName,
		std::vector< stk::mesh::Entity > &	sides
	)		const

Get Entities corresponding to the side set requested. The Entites in the vector should be a dimension lower then getDimension().

Parameters

[in]	sideName	Name of side set
[in,out]	sides	Vector of entities containing the requested sides.

Definition at line 1289 of file Panzer_STK_Interface.cpp.

◆ getMySides() [2/2]

void panzer_stk::STK_Interface::getMySides	(	const std::string &	sideName,
		const std::string &	blockName,
		std::vector< stk::mesh::Entity > &	sides
	)		const

Get Entities corresponding to the locally owned part of the side set requested. This also limits the entities to be in a particular element block. The Entites in the vector should be a dimension lower then getDimension().

Parameters

[in]	sideName	Name of side set
[in]	blockName	Name of block
[in,out]	sides	Vector of entities containing the requested sides.

Definition at line 1302 of file Panzer_STK_Interface.cpp.

◆ getAllSides() [1/2]

void panzer_stk::STK_Interface::getAllSides	(	const std::string &	sideName,
		std::vector< stk::mesh::Entity > &	sides
	)		const

Get Entities corresponding to the locally owned part of the side set requested. The Entites in the vector should be a dimension lower then getDimension().

Parameters

[in]	sideName	Name of side set
[in,out]	sides	Vector of entities containing the requested sides.

Definition at line 1319 of file Panzer_STK_Interface.cpp.

◆ getAllSides() [2/2]

void panzer_stk::STK_Interface::getAllSides	(	const std::string &	sideName,
		const std::string &	blockName,
		std::vector< stk::mesh::Entity > &	sides
	)		const

Get Entities corresponding to the side set requested. This also limits the entities to be in a particular element block. The Entites in the vector should be a dimension lower then getDimension().

Parameters

[in]	sideName	Name of side set
[in]	blockName	Name of block
[in,out]	sides	Vector of entities containing the requested sides.

Definition at line 1331 of file Panzer_STK_Interface.cpp.

◆ getMyNodes()

void panzer_stk::STK_Interface::getMyNodes	(	const std::string &	sideName,
		const std::string &	blockName,
		std::vector< stk::mesh::Entity > &	nodes
	)		const

Get Entities corresponding to the node set requested. This also limits the entities to be in a particular element block. The Entites in the vector should be of dimension 0.

Parameters

[in]	sideName	Name of side set
[in]	blockName	Name of block
[in,out]	nodes	Vector of entities containing the requested nodes.

Definition at line 1348 of file Panzer_STK_Interface.cpp.

◆ findConnectivityById()

stk::mesh::Entity panzer_stk::STK_Interface::findConnectivityById	(	stk::mesh::Entity	src,
		stk::mesh::EntityRank	tgt_rank,
		unsigned	rel_id
	)		const

Searches for connected entity by rank and relation id. Returns invalid entity on failure.

Parameters

[in]	src	The handle to the source entity (the 'from' part of the relation)
[in]	tgt_rank	The entity rank of relations to search
[in]	rel_id	The id of the relation to search for

Definition at line 581 of file Panzer_STK_Interface.cpp.

◆ writeToExodus() [1/2]

void panzer_stk::STK_Interface::writeToExodus	(	const std::string &	filename,
		const bool	append = `false`
	)

Write this mesh and associated fields to the given output file.

Note: This will only write a single timestep at time = 0.

Parameters

[in]	filename	The name of the output Exodus file.
[in]	append	If set to true, the output will be appended to the output Exodus file. If set to false, output file will be overwritten. Default is false.

Definition at line 601 of file Panzer_STK_Interface.cpp.

◆ setupExodusFile() [1/2]

void panzer_stk::STK_Interface::setupExodusFile	(	const std::string &	filename,
		const bool	append = `false`,
		const bool	append_after_restart_time = `false`,
		const double	restart_time = `0.0`
	)

Set up an output Exodus file for writing results.

Create an output mesh associated with the given filename and add the fields to it.

Note: No writing is actually done at this stage. That happens with a call to writeToExodus(double timestep).

Parameters

[in]	filename	The name of the output Exodus file.
[in]	append	If set to true, the output will be appended to the output Exodus file. If set to false, output file will be overwritten. Default is false.
[in]	append_after_restart_time	If set to true, instead of appending to the end of the Exodus file, this option will append new writes after a specified time and overwrite subsequent time steps that were in the file. Allows users to restart anywhere in the exodus file and write consistently. If set to false, the next write will append to the end of the file. Default is false.
[in]	restart_time	If append_after_restart_time is true, this is the time value to append after. Otherwise this value is ignored.

Exceptions

`std::logic_error` If the STK_Interface does not yet have a MPI communicator.

Definition at line 615 of file Panzer_STK_Interface.cpp.

◆ setupExodusFile() [2/2]

void panzer_stk::STK_Interface::setupExodusFile	(	const std::string &	filename,
		const std::vector< Ioss::Property > &	ioss_properties,
		const bool	append = `false`,
		const bool	append_after_restart_time = `false`,
		const double	restart_time = `0.0`
	)

Set up an output Exodus file for writing results.

Create an output mesh associated with the given filename and add the fields to it.

Note: No writing is actually done at this stage. That happens with a call to writeToExodus(double timestep).

Parameters

[in]	filename	The name of the output Exodus file.
[in]	ioss_properties	A vector of ioss properties to set on the STK mesh ioss reader/writer.
[in]	append	If set to true, the output will be appended to the output Exodus file. If set to false, output file will be overwritten. Default is false.
[in]	append_after_restart_time	If set to true, instead of appending to the end of the Exodus file, this option will append new writes after a specified time and overwrite subsequent time steps that were in the file. Allows users to restart anywhere in the exodus file and write consistently. If set to false, the next write will append to the end of the file. Default is false.
[in]	restart_time	If append_after_restart_time is true, this is the time value to append after. Otherwise this value is ignored.

Exceptions

`std::logic_error` If the STK_Interface does not yet have a MPI communicator.

Definition at line 630 of file Panzer_STK_Interface.cpp.

◆ writeToExodus() [2/2]

void panzer_stk::STK_Interface::writeToExodus ( double timestep )

Write this mesh and associated fields at the given timestep.

Write this mesh and the current state of the associated fields for time = timestep to the output Exodus file created via setupExodusFile().

Note: setupExodusFile(const std::string& filename) must be called before any invocations of this routine.

Parameters

[in] timestep The simulation time at which you're writing the results.

Definition at line 694 of file Panzer_STK_Interface.cpp.

◆ addGlobalToExodus() [1/4]

void panzer_stk::STK_Interface::addGlobalToExodus	(	const std::string &	key,
		const int &	value
	)

Add an int global variable to the information to be written to the Exodus output file.

This allows you to add any arbitrary global data (that is, data not associated with nodes, elements, etc.) to the Exodus output file tagged with a string key.

Note: Data is not actually written to the output Exodus file until writeToExodus() is called.

Parameters

[in]	key	The name of the global variable you'll be adding. Note that keys should be unique if you're adding multiple global variables with repeated calls to `addGlobalToExodus()`. Repeated calls with identical keys will result in the value associated with the key simply being overwritten.
[in]	value	The value of the global variable you'll be adding.

Definition at line 845 of file Panzer_STK_Interface.cpp.

◆ addGlobalToExodus() [2/4]

void panzer_stk::STK_Interface::addGlobalToExodus	(	const std::string &	key,
		const double &	value
	)

Add a double global variable to the information to be written to the Exodus output file.

This allows you to add any arbitrary global data (that is, data not associated with nodes, elements, etc.) to the Exodus output file tagged with a string key.

Note: Data is not actually written to the output Exodus file until writeToExodus() is called.

Parameters

[in]	key	The name of the global variable you'll be adding. Note that keys should be unique if you're adding multiple global variables with repeated calls to `addGlobalToExodus()`. Repeated calls with identical keys will result in the value associated with the key simply being overwritten.
[in]	value	The value of the global variable you'll be adding.

Definition at line 859 of file Panzer_STK_Interface.cpp.

◆ addGlobalToExodus() [3/4]

void panzer_stk::STK_Interface::addGlobalToExodus	(	const std::string &	key,
		const std::vector< int > &	value
	)

Add a std::vector<int> global variable to the information to be written to the Exodus output file.

This allows you to add any arbitrary global data (that is, data not associated with nodes, elements, etc.) to the Exodus output file tagged with a string key.

Note: Data is not actually written to the output Exodus file until writeToExodus() is called.

Parameters

[in]	key	The name of the global variable you'll be adding. Note that keys should be unique if you're adding multiple global variables with repeated calls to `addGlobalToExodus()`. Repeated calls with identical keys will result in the value associated with the key simply being overwritten.
[in]	value	The value of the global variable you'll be adding.

Definition at line 873 of file Panzer_STK_Interface.cpp.

◆ addGlobalToExodus() [4/4]

void panzer_stk::STK_Interface::addGlobalToExodus	(	const std::string &	key,
		const std::vector< double > &	value
	)

Add a std::vector<double> global variable to the information to be written to the Exodus output file.

This allows you to add any arbitrary global data (that is, data not associated with nodes, elements, etc.) to the Exodus output file tagged with a string key.

Note: Data is not actually written to the output Exodus file until writeToExodus() is called.

Parameters

[in]	key	The name of the global variable you'll be adding. Note that keys should be unique if you're adding multiple global variables with repeated calls to `addGlobalToExodus()`. Repeated calls with identical keys will result in the value associated with the key simply being overwritten.
[in]	value	The value of the global variable you'll be adding.

Definition at line 888 of file Panzer_STK_Interface.cpp.

◆ getComm()

Teuchos::RCP< const Teuchos::Comm< int > > panzer_stk::STK_Interface::getComm ( ) const

get the comm associated with this mesh

Definition at line 2018 of file Panzer_STK_Interface.cpp.

◆ getBulkData()

Teuchos::RCP< stk::mesh::BulkData > panzer_stk::STK_Interface::getBulkData ( ) const

inline

Returns the underlying STK bulk data object.

Definition at line 629 of file Panzer_STK_Interface.hpp.

◆ getMetaData()

Teuchos::RCP< stk::mesh::MetaData > panzer_stk::STK_Interface::getMetaData ( ) const

inline

Returns the underlying STK meta data object.

Definition at line 631 of file Panzer_STK_Interface.hpp.

◆ isWritable()

bool panzer_stk::STK_Interface::isWritable ( ) const

Returns true if the mesh can be written out to Exodus (i.e. is IOSS/output set up)?

Definition at line 897 of file Panzer_STK_Interface.cpp.

◆ isModifiable()

bool panzer_stk::STK_Interface::isModifiable ( ) const

inline

Returns true if the bulk data manager is currently in modification mode (i.e. between beginModification() and endModification())

Definition at line 643 of file Panzer_STK_Interface.hpp.

◆ getDimension()

unsigned panzer_stk::STK_Interface::getDimension ( ) const

inline

get the dimension

Definition at line 648 of file Panzer_STK_Interface.hpp.

◆ getNumElementBlocks()

std::size_t panzer_stk::STK_Interface::getNumElementBlocks ( ) const

inline

get the block count

Definition at line 652 of file Panzer_STK_Interface.hpp.

◆ getElementBlockNames()

void panzer_stk::STK_Interface::getElementBlockNames ( std::vector< std::string > & names ) const

Get a vector containing the names of the element blocks. This function always returns the current set of element blocks in lexiographic order (uses the sorting built into the std::map). This method can only be called after initialize.

Parameters

[in,out] names Vector of names of the element blocks.

Definition at line 1365 of file Panzer_STK_Interface.cpp.

◆ getSidesetNames()

void panzer_stk::STK_Interface::getSidesetNames ( std::vector< std::string > & name ) const

Get a vector containing the names of the side sets. This function always returns the current set of side sets in lexiographic order (uses the sorting built into the std::map). This method can only be called after initialize.

Parameters

[in,out] names Vector of names of the side sets

Definition at line 1377 of file Panzer_STK_Interface.cpp.

◆ getNodesetNames()

void panzer_stk::STK_Interface::getNodesetNames ( std::vector< std::string > & name ) const

Get a vector containing the names of the node sets. This function always returns the current set of node sets in lexiographic order (uses the sorting built into the std::map). This method can only be called after initialize.

Parameters

[in,out] names Vector of names of the node sets.

Definition at line 1389 of file Panzer_STK_Interface.cpp.

◆ getEdgeBlockNames()

void panzer_stk::STK_Interface::getEdgeBlockNames ( std::vector< std::string > & names ) const

Get a vector containing the names of the edge blocks. This function always returns the current set of edge blocks in lexiographic order (uses the sorting built into the std::map). This method can only be called after initialize.

Parameters

[in,out] names Vector of names of the edge blocks.

Definition at line 1399 of file Panzer_STK_Interface.cpp.

◆ getFaceBlockNames()

void panzer_stk::STK_Interface::getFaceBlockNames ( std::vector< std::string > & names ) const

Get a vector containing the names of the face blocks. This function always returns the current set of face blocks in lexiographic order (uses the sorting built into the std::map). This method can only be called after initialize.

Parameters

[in,out] names Vector of names of the face blocks.

Definition at line 1409 of file Panzer_STK_Interface.cpp.

◆ getOwnedPart()

stk::mesh::Part * panzer_stk::STK_Interface::getOwnedPart ( ) const

inline

Get a pointer to the locally owned part.

Definition at line 701 of file Panzer_STK_Interface.hpp.

◆ getElementBlockPart()

stk::mesh::Part * panzer_stk::STK_Interface::getElementBlockPart ( const std::string & name ) const

inline

get the block part

Definition at line 705 of file Panzer_STK_Interface.hpp.

◆ getEdgeBlock()

stk::mesh::Part * panzer_stk::STK_Interface::getEdgeBlock ( const std::string & name ) const

inline

get the block part

Definition at line 713 of file Panzer_STK_Interface.hpp.

◆ getFaceBlock()

stk::mesh::Part * panzer_stk::STK_Interface::getFaceBlock ( const std::string & name ) const

inline

get the block part

Definition at line 721 of file Panzer_STK_Interface.hpp.

◆ getNumSidesets()

std::size_t panzer_stk::STK_Interface::getNumSidesets ( ) const

inline

get the side set count

Definition at line 729 of file Panzer_STK_Interface.hpp.

◆ getSideset()

stk::mesh::Part * panzer_stk::STK_Interface::getSideset ( const std::string & name ) const

inline

Definition at line 732 of file Panzer_STK_Interface.hpp.

◆ getNumNodesets()

std::size_t panzer_stk::STK_Interface::getNumNodesets ( ) const

inline

get the side set count

Definition at line 739 of file Panzer_STK_Interface.hpp.

◆ getNodeset()

stk::mesh::Part * panzer_stk::STK_Interface::getNodeset ( const std::string & name ) const

inline

Definition at line 742 of file Panzer_STK_Interface.hpp.

◆ getEntityCounts()

std::size_t panzer_stk::STK_Interface::getEntityCounts ( unsigned entityRank ) const

get the global counts for the entity of specified rank

Definition at line 1042 of file Panzer_STK_Interface.cpp.

◆ getMaxEntityId()

stk::mesh::EntityId panzer_stk::STK_Interface::getMaxEntityId ( unsigned entityRank ) const

get max entity ID of type entityRank

Definition at line 1050 of file Panzer_STK_Interface.cpp.

◆ getElementsSharingNode()

void panzer_stk::STK_Interface::getElementsSharingNode	(	stk::mesh::EntityId	nodeId,
		std::vector< stk::mesh::Entity > &	elements
	)		const

get a set of elements sharing a single node

Definition at line 906 of file Panzer_STK_Interface.cpp.

◆ getNodeIdsForElement()

void panzer_stk::STK_Interface::getNodeIdsForElement	(	stk::mesh::Entity	element,
		std::vector< stk::mesh::EntityId > &	nodeIds
	)		const

get a list of node ids for nodes connected to an element

Definition at line 989 of file Panzer_STK_Interface.cpp.

◆ getOwnedElementsSharingNode() [1/2]

void panzer_stk::STK_Interface::getOwnedElementsSharingNode	(	stk::mesh::Entity	node,
		std::vector< stk::mesh::Entity > &	elements,
		std::vector< int > &	relIds
	)		const

Get set of owned elements sharing a single node and its local node id.

Parameters

[in]	node	the node to find owned elements sharing.
[out]	elements	populated with the owned elements that share the node.
[out]	relIds	populated with the node's local (relation) ID within each corresponding element in elements.

Definition at line 919 of file Panzer_STK_Interface.cpp.

◆ getOwnedElementsSharingNode() [2/2]

void panzer_stk::STK_Interface::getOwnedElementsSharingNode	(	stk::mesh::EntityId	nodeId,
		std::vector< stk::mesh::Entity > &	elements,
		std::vector< int > &	relIds,
		unsigned int	matchType
	)		const

Get set of owned elements sharing a single node and its local node id.

Parameters

[in]	nodeId	global ID of the node to find owned elements sharing.
[out]	elements	populated with the owned elements that share the node.
[out]	relIds	populated with the node's local (relation) ID within each corresponding element in elements.
[in]	matchType	entity rank to match on (e.g. node, edge, face) when locating shared relations.

Definition at line 939 of file Panzer_STK_Interface.cpp.

◆ getElementsSharingNodes()

void panzer_stk::STK_Interface::getElementsSharingNodes	(	const std::vector< stk::mesh::EntityId >	nodeId,
		std::vector< stk::mesh::Entity > &	elements
	)		const

get a set of elements sharing multiple nodes

Definition at line 957 of file Panzer_STK_Interface.cpp.

◆ buildSubcells()

void panzer_stk::STK_Interface::buildSubcells ( )

force the mesh to build subcells: edges and faces

Definition at line 1058 of file Panzer_STK_Interface.cpp.

◆ elementLocalId() [1/2]

std::size_t panzer_stk::STK_Interface::elementLocalId ( stk::mesh::Entity elmt ) const

Get an elements local index

Definition at line 1419 of file Panzer_STK_Interface.cpp.

◆ elementLocalId() [2/2]

std::size_t panzer_stk::STK_Interface::elementLocalId ( stk::mesh::EntityId gid ) const

Get an elements local index

Definition at line 1426 of file Panzer_STK_Interface.cpp.

◆ elementGlobalId() [1/2]

stk::mesh::EntityId panzer_stk::STK_Interface::elementGlobalId ( std::size_t lid ) const

inline

Get an elements global index

Definition at line 799 of file Panzer_STK_Interface.hpp.

◆ elementGlobalId() [2/2]

stk::mesh::EntityId panzer_stk::STK_Interface::elementGlobalId ( stk::mesh::Entity elmt ) const

inline

Get an elements global index

Definition at line 804 of file Panzer_STK_Interface.hpp.

◆ isEdgeLocal() [1/2]

bool panzer_stk::STK_Interface::isEdgeLocal ( stk::mesh::Entity edge ) const

Is an edge local to this processor?

Definition at line 1437 of file Panzer_STK_Interface.cpp.

◆ isEdgeLocal() [2/2]

bool panzer_stk::STK_Interface::isEdgeLocal ( stk::mesh::EntityId gid ) const

Is an edge local to this processor?

Definition at line 1442 of file Panzer_STK_Interface.cpp.

◆ edgeLocalId() [1/2]

std::size_t panzer_stk::STK_Interface::edgeLocalId ( stk::mesh::Entity elmt ) const

Get an edge's local index

Definition at line 1451 of file Panzer_STK_Interface.cpp.

◆ edgeLocalId() [2/2]

std::size_t panzer_stk::STK_Interface::edgeLocalId ( stk::mesh::EntityId gid ) const

Get an edge's local index

Definition at line 1456 of file Panzer_STK_Interface.cpp.

◆ edgeGlobalId() [1/2]

stk::mesh::EntityId panzer_stk::STK_Interface::edgeGlobalId ( std::size_t lid ) const

inline

Get an edge's global index

Definition at line 825 of file Panzer_STK_Interface.hpp.

◆ edgeGlobalId() [2/2]

stk::mesh::EntityId panzer_stk::STK_Interface::edgeGlobalId ( stk::mesh::Entity edge ) const

inline

Get an edge's global index

Definition at line 830 of file Panzer_STK_Interface.hpp.

◆ isFaceLocal() [1/2]

bool panzer_stk::STK_Interface::isFaceLocal ( stk::mesh::Entity face ) const

Is a face local to this processor?

Definition at line 1463 of file Panzer_STK_Interface.cpp.

◆ isFaceLocal() [2/2]

bool panzer_stk::STK_Interface::isFaceLocal ( stk::mesh::EntityId gid ) const

Is a face local to this processor?

Definition at line 1468 of file Panzer_STK_Interface.cpp.

◆ faceLocalId() [1/2]

std::size_t panzer_stk::STK_Interface::faceLocalId ( stk::mesh::Entity elmt ) const

Get a face's local index

Definition at line 1477 of file Panzer_STK_Interface.cpp.

◆ faceLocalId() [2/2]

std::size_t panzer_stk::STK_Interface::faceLocalId ( stk::mesh::EntityId gid ) const

Get a face's local index

Definition at line 1482 of file Panzer_STK_Interface.cpp.

◆ faceGlobalId() [1/2]

stk::mesh::EntityId panzer_stk::STK_Interface::faceGlobalId ( std::size_t lid ) const

inline

Get a face's global index

Definition at line 851 of file Panzer_STK_Interface.hpp.

◆ faceGlobalId() [2/2]

stk::mesh::EntityId panzer_stk::STK_Interface::faceGlobalId ( stk::mesh::Entity face ) const

inline

Get a face's global index

Definition at line 856 of file Panzer_STK_Interface.hpp.

◆ entityOwnerRank()

unsigned panzer_stk::STK_Interface::entityOwnerRank ( stk::mesh::Entity entity ) const

inline

Get an Entity's parallel owner (process rank)

Definition at line 861 of file Panzer_STK_Interface.hpp.

◆ isValid()

bool panzer_stk::STK_Interface::isValid ( stk::mesh::Entity entity ) const

inline

Check if entity handle is valid

Definition at line 866 of file Panzer_STK_Interface.hpp.

◆ containingBlockId()

std::string panzer_stk::STK_Interface::containingBlockId ( stk::mesh::Entity elmt ) const

Get the containing block ID of this element.

Definition at line 1490 of file Panzer_STK_Interface.cpp.

◆ getSolutionField()

stk::mesh::Field< double > * panzer_stk::STK_Interface::getSolutionField	(	const std::string &	fieldName,
		const std::string &	blockId
	)		const

Get the stk mesh field pointer associated with a particular solution value Assumes there is a field associated with "fieldName,blockId" pair. If none is found an exception (std::runtime_error) is raised.

Definition at line 1498 of file Panzer_STK_Interface.cpp.

◆ getCellField()

stk::mesh::Field< double > * panzer_stk::STK_Interface::getCellField	(	const std::string &	fieldName,
		const std::string &	blockId
	)		const

Get the stk mesh field pointer associated with a particular value Assumes there is a field associated with "fieldName,blockId" pair. If none is found an exception (std::runtime_error) is raised.

Definition at line 1512 of file Panzer_STK_Interface.cpp.

◆ getEdgeField()

stk::mesh::Field< double > * panzer_stk::STK_Interface::getEdgeField	(	const std::string &	fieldName,
		const std::string &	blockId
	)		const

Get the stk mesh field pointer associated with a particular value Assumes there is a field associated with "fieldName,blockId" pair. If none is found an exception (std::runtime_error) is raised.

Definition at line 1526 of file Panzer_STK_Interface.cpp.

◆ getFaceField()

stk::mesh::Field< double > * panzer_stk::STK_Interface::getFaceField	(	const std::string &	fieldName,
		const std::string &	blockId
	)		const

Get the stk mesh field pointer associated with a particular value Assumes there is a field associated with "fieldName,blockId" pair. If none is found an exception (std::runtime_error) is raised.

Definition at line 1540 of file Panzer_STK_Interface.cpp.

◆ getProcessorIdField()

ProcIdFieldType * panzer_stk::STK_Interface::getProcessorIdField ( )

inline

Get the field holding each entity's owning processor rank.

Definition at line 902 of file Panzer_STK_Interface.hpp.

◆ isInitialized()

bool panzer_stk::STK_Interface::isInitialized ( ) const

inline

Returns true if initialize been called on this mesh object.

Definition at line 905 of file Panzer_STK_Interface.hpp.

◆ getElementsOrderedByLID()

Teuchos::RCP< const std::vector< stk::mesh::Entity > > panzer_stk::STK_Interface::getElementsOrderedByLID ( ) const

Get Vector of element entities ordered by their LID, returns an RCP so that it is easily stored by the caller.

Definition at line 1554 of file Panzer_STK_Interface.cpp.

◆ setSolutionFieldData()

template<typename ArrayT >

void panzer_stk::STK_Interface::setSolutionFieldData	(	const std::string &	fieldName,
		const std::string &	blockId,
		const std::vector< std::size_t > &	localElementIds,
		const ArrayT &	solutionValues,
		double	scaleValue = `1.0`
	)

Writes a particular field to an array. Notice this is setup to work with the worksets associated with Panzer.

Parameters

[in]	fieldName	Name of field to be filled
[in]	blockId	Name of block this set of elements belongs to
[in]	localElementIds	Local element IDs for this set of solution values
[in]	solutionValues	An two dimensional array object sized by (Cells,Basis Count)

Note: The block ID is not strictly needed in this context. However forcing the user to provide it does permit an additional level of safety. The implicit assumption is that the elements being "set" are part of the specified block. This prevents the need to perform a null pointer check on the field data, because the STK_Interface construction of the fields should force it to be nonnull...

Definition at line 1628 of file Panzer_STK_Interface.hpp.

◆ getSolutionFieldData()

template<typename ArrayT >

void panzer_stk::STK_Interface::getSolutionFieldData	(	const std::string &	fieldName,
		const std::string &	blockId,
		const std::vector< std::size_t > &	localElementIds,
		ArrayT &	solutionValues
	)		const

Reads a particular field into an array. Notice this is setup to work with the worksets associated with Panzer.

Parameters

[in]	fieldName	Name of field to be filled
[in]	blockId	Name of block this set of elements belongs to
[in]	localElementIds	Local element IDs for this set of solution values
[in]	solutionValues	An two dimensional array object sized by (Cells,Basis Count)

Note: The block ID is not strictly needed in this context. However forcing the user to provide it does permit an additional level of safety. The implicit assumption is that the elements being retrieved are part of the specified block. This prevents the need to perform a null pointer check on the field data, because the STK_Interface construction of the fields should force it to be nonnull...

Definition at line 1690 of file Panzer_STK_Interface.hpp.

◆ setCellFieldData()

template<typename ArrayT >

void panzer_stk::STK_Interface::setCellFieldData	(	const std::string &	fieldName,
		const std::string &	blockId,
		const std::vector< std::size_t > &	localElementIds,
		const ArrayT &	solutionValues,
		double	scaleValue = `1.0`
	)

Writes a particular field to a cell array. Notice this is setup to work with the worksets associated with Panzer.

Parameters

[in]	fieldName	Name of field to be filled
[in]	blockId	Name of block this set of elements belongs to
[in]	localElementIds	Local element IDs for this set of solution values
[in]	solutionValues	A one dimensional array object sized by (Cells)

Note: The block ID is not strictly needed in this context. However forcing the user to provide it does permit an additional level of safety. The implicit assumption is that the elements being "set" are part of the specified block. This prevents the need to perform a null pointer check on the field data, because the STK_Interface construction of the fields should force it to be nonnull...

Definition at line 1720 of file Panzer_STK_Interface.hpp.

◆ getEdgesOrderedByLID()

Teuchos::RCP< const std::vector< stk::mesh::Entity > > panzer_stk::STK_Interface::getEdgesOrderedByLID ( ) const

Get Vector of edge entities ordered by their LID, returns an RCP so that it is easily stored by the caller.

Definition at line 1585 of file Panzer_STK_Interface.cpp.

◆ getFacesOrderedByLID()

Teuchos::RCP< const std::vector< stk::mesh::Entity > > panzer_stk::STK_Interface::getFacesOrderedByLID ( ) const

Get Vector of face entities ordered by their LID, returns an RCP so that it is easily stored by the caller.

Definition at line 1630 of file Panzer_STK_Interface.cpp.

◆ setEdgeFieldData()

template<typename ArrayT >

void panzer_stk::STK_Interface::setEdgeFieldData	(	const std::string &	fieldName,
		const std::string &	blockId,
		const std::vector< std::size_t > &	localEdgeIds,
		const ArrayT &	edgeValues,
		double	scaleValue = `1.0`
	)

Writes a particular field to an edge array. Notice this is setup to work with the worksets associated with Panzer.

Parameters

[in]	fieldName	Name of field to be filled
[in]	blockId	Name of block this set of elements belongs to
[in]	localEdgeIds	Local edge IDs for this set of solution values
[in]	edgeValues	A one dimensional array object sized by (edges)

Note: The block ID is not strictly needed in this context. However forcing the user to provide it does permit an additional level of safety. The implicit assumption is that the elements being "set" are part of the specified block. This prevents the need to perform a null pointer check on the field data, because the STK_Interface construction of the fields should force it to be nonnull...

Definition at line 1741 of file Panzer_STK_Interface.hpp.

◆ setFaceFieldData()

template<typename ArrayT >

void panzer_stk::STK_Interface::setFaceFieldData	(	const std::string &	fieldName,
		const std::string &	blockId,
		const std::vector< std::size_t > &	localFaceIds,
		const ArrayT &	faceValues,
		double	scaleValue = `1.0`
	)

Writes a particular field to a face array. Notice this is setup to work with the worksets associated with Panzer.

Parameters

[in]	fieldName	Name of field to be filled
[in]	blockId	Name of block this set of elements belongs to
[in]	localFaceIds	Local face IDs for this set of solution values
[in]	faceValues	A one dimensional array object sized by (faces)

Note: The block ID is not strictly needed in this context. However forcing the user to provide it does permit an additional level of safety. The implicit assumption is that the elements being "set" are part of the specified block. This prevents the need to perform a null pointer check on the field data, because the STK_Interface construction of the fields should force it to be nonnull...

Definition at line 1762 of file Panzer_STK_Interface.hpp.

◆ getElementVertices() [1/4]

template<typename ArrayT >

void panzer_stk::STK_Interface::getElementVertices	(	const std::vector< std::size_t > &	localIds,
		ArrayT &	vertices
	)		const

Get vertices associated with a number of elements of the same geometry.

Parameters

[in]	localIds	Element local IDs to construct vertices
[out]	vertices	Output array that will be sized (`localIds.size()`,#Vertices,#Dim)

Note: If not all elements have the same number of vertices an exception is thrown. If the size of localIds is 0, the function will silently return

Definition at line 1785 of file Panzer_STK_Interface.hpp.

◆ getElementVertices() [2/4]

template<typename ArrayT >

void panzer_stk::STK_Interface::getElementVertices	(	const std::vector< stk::mesh::Entity > &	elements,
		ArrayT &	vertices
	)		const

Get vertices associated with a number of elements of the same geometry.

Parameters

[in]	elements	Element entities to construct vertices
[out]	vertices	Output array that will be sized (`localIds.size()`,#Vertices,#Dim)

Note: If not all elements have the same number of vertices an exception is thrown. If the size of localIds is 0, the function will silently return

Definition at line 1809 of file Panzer_STK_Interface.hpp.

◆ getElementVertices() [3/4]

template<typename ArrayT >

void panzer_stk::STK_Interface::getElementVertices	(	const std::vector< std::size_t > &	localIds,
		const std::string &	eBlock,
		ArrayT &	vertices
	)		const

Get vertices associated with a number of elements of the same geometry.

Parameters

[in]	localIds	Element local IDs to construct vertices
[in]	eBlock	Element block the elements are in
[out]	vertices	Output array that will be sized (`localIds.size()`,#Vertices,#Dim)

Note: If not all elements have the same number of vertices an exception is thrown. If the size of localIds is 0, the function will silently return

Definition at line 1833 of file Panzer_STK_Interface.hpp.

◆ getElementVertices() [4/4]

template<typename ArrayT >

void panzer_stk::STK_Interface::getElementVertices	(	const std::vector< stk::mesh::Entity > &	elements,
		const std::string &	eBlock,
		ArrayT &	vertices
	)		const

Get vertices associated with a number of elements of the same geometry.

Parameters

[in]	elements	Element entities to construct vertices
[in]	eBlock	Element block the elements are in
[out]	vertices	Output array that will be sized (`localIds.size()`,#Vertices,#Dim)

Note: If not all elements have the same number of vertices an exception is thrown. If the size of localIds is 0, the function will silently return

Definition at line 1822 of file Panzer_STK_Interface.hpp.

◆ getElementVerticesNoResize() [1/4]

template<typename ArrayT >

void panzer_stk::STK_Interface::getElementVerticesNoResize	(	const std::vector< std::size_t > &	localIds,
		ArrayT &	vertices
	)		const

Get vertices associated with a number of elements of the same geometry. The vertex array will not be resized.

Parameters

[in]	localIds	Element local IDs to construct vertices
[out]	vertices	Output array that will be sized (`localIds.size()`,#Vertices,#Dim)

Note: If not all elements have the same number of vertices an exception is thrown. If the size of localIds is 0, the function will silently return

Definition at line 1851 of file Panzer_STK_Interface.hpp.

◆ getElementVerticesNoResize() [2/4]

template<typename ArrayT >

void panzer_stk::STK_Interface::getElementVerticesNoResize	(	const std::vector< stk::mesh::Entity > &	elements,
		ArrayT &	vertices
	)		const

Get vertices associated with a number of elements of the same geometry. The vertex array will not be resized.

Parameters

[in]	elements	Element entities to construct vertices
[out]	vertices	Output array that will be sized (`localIds.size()`,#Vertices,#Dim)

Note: If not all elements have the same number of vertices an exception is thrown. If the size of localIds is 0, the function will silently return

Definition at line 1875 of file Panzer_STK_Interface.hpp.

◆ getElementVerticesNoResize() [3/4]

template<typename ArrayT >

void panzer_stk::STK_Interface::getElementVerticesNoResize	(	const std::vector< std::size_t > &	localIds,
		const std::string &	eBlock,
		ArrayT &	vertices
	)		const

Get vertices associated with a number of elements of the same geometry. The vertex array will not be resized.

Parameters

[in]	localIds	Element local IDs to construct vertices
[in]	eBlock	Element block the elements are in
[out]	vertices	Output array that will be sized (`localIds.size()`,#Vertices,#Dim)

Note: If not all elements have the same number of vertices an exception is thrown. If the size of localIds is 0, the function will silently return

Definition at line 1899 of file Panzer_STK_Interface.hpp.

◆ getElementVerticesNoResize() [4/4]

template<typename ArrayT >

void panzer_stk::STK_Interface::getElementVerticesNoResize	(	const std::vector< stk::mesh::Entity > &	elements,
		const std::string &	eBlock,
		ArrayT &	vertices
	)		const

Get vertices associated with a number of elements of the same geometry. The vertex array will not be resized.

Parameters

[in]	elements	Element entities to construct vertices
[in]	eBlock	Element block the elements are in
[out]	vertices	Output array that will be sized (`localIds.size()`,#Vertices,#Dim)

Note: If not all elements have the same number of vertices an exception is thrown. If the size of localIds is 0, the function will silently return

Definition at line 1888 of file Panzer_STK_Interface.hpp.

◆ getElementNodes() [1/4]

template<typename ArrayT >

void panzer_stk::STK_Interface::getElementNodes	(	const std::vector< std::size_t > &	localIds,
		ArrayT &	nodes
	)		const

Get nodes associated with a number of elements of the same geometry.

Parameters

[in]	localIds	Element local IDs to construct nodes
[out]	nodes	Output array that will be sized (`localIds.size()`,#Nodes,#Dim)

Note: If not all elements have the same number of nodes an exception is thrown. If the size of localIds is 0, the function will silently return

Definition at line 2114 of file Panzer_STK_Interface.hpp.

◆ getElementNodes() [2/4]

template<typename ArrayT >

void panzer_stk::STK_Interface::getElementNodes	(	const std::vector< stk::mesh::Entity > &	elements,
		ArrayT &	nodes
	)		const

Get nodes associated with a number of elements of the same geometry.

Parameters

[in]	elements	Element entities to construct nodes
[out]	nodes	Output array that will be sized (`localIds.size()`,#Nodes,#Dim)

Note: If not all elements have the same number of nodes an exception is thrown. If the size of localIds is 0, the function will silently return

Definition at line 2138 of file Panzer_STK_Interface.hpp.

◆ getElementNodes() [3/4]

template<typename ArrayT >

void panzer_stk::STK_Interface::getElementNodes	(	const std::vector< std::size_t > &	localIds,
		const std::string &	eBlock,
		ArrayT &	nodes
	)		const

Get nodes associated with a number of elements of the same geometry.

Parameters

[in]	localIds	Element local IDs to construct nodes
[in]	eBlock	Element block the elements are in
[out]	nodes	Output array that will be sized (`localIds.size()`,#Nodes,#Dim)

Note: If not all elements have the same number of nodes an exception is thrown. If the size of localIds is 0, the function will silently return

Definition at line 2162 of file Panzer_STK_Interface.hpp.

◆ getElementNodes() [4/4]

template<typename ArrayT >

void panzer_stk::STK_Interface::getElementNodes	(	const std::vector< stk::mesh::Entity > &	elements,
		const std::string &	eBlock,
		ArrayT &	nodes
	)		const

Get nodes associated with a number of elements of the same geometry.

Parameters

[in]	elements	Element entities to construct nodes
[in]	eBlock	Element block the elements are in
[out]	nodes	Output array that will be sized (`localIds.size()`,#Nodes,#Dim)

Note: If not all elements have the same number of nodes an exception is thrown. If the size of localIds is 0, the function will silently return

Definition at line 2151 of file Panzer_STK_Interface.hpp.

◆ getElementNodesNoResize() [1/4]

template<typename ArrayT >

void panzer_stk::STK_Interface::getElementNodesNoResize	(	const std::vector< std::size_t > &	localIds,
		ArrayT &	nodes
	)		const

Get nodes associated with a number of elements of the same geometry. The node array will not be resized.

Parameters

[in]	localIds	Element local IDs to construct nodes
[out]	nodes	Output array that will be sized (`localIds.size()`,#Nodes,#Dim)

Note: If not all elements have the same number of nodes an exception is thrown. If the size of localIds is 0, the function will silently return

Definition at line 2180 of file Panzer_STK_Interface.hpp.

◆ getElementNodesNoResize() [2/4]

template<typename ArrayT >

void panzer_stk::STK_Interface::getElementNodesNoResize	(	const std::vector< stk::mesh::Entity > &	elements,
		ArrayT &	nodes
	)		const

Get nodes associated with a number of elements of the same geometry. The node array will not be resized.

Parameters

[in]	elements	Element entities to construct nodes
[out]	nodes	Output array that will be sized (`localIds.size()`,#Nodes,#Dim)

Note: If not all elements have the same number of nodes an exception is thrown. If the size of localIds is 0, the function will silently return

Definition at line 2204 of file Panzer_STK_Interface.hpp.

◆ getElementNodesNoResize() [3/4]

template<typename ArrayT >

void panzer_stk::STK_Interface::getElementNodesNoResize	(	const std::vector< std::size_t > &	localIds,
		const std::string &	eBlock,
		ArrayT &	nodes
	)		const

Get nodes associated with a number of elements of the same geometry. The node array will not be resized.

Parameters

[in]	localIds	Element local IDs to construct nodes
[in]	eBlock	Element block the elements are in
[out]	nodes	Output array that will be sized (`localIds.size()`,#Nodes,#Dim)

Note: If not all elements have the same number of nodes an exception is thrown. If the size of localIds is 0, the function will silently return

Definition at line 2228 of file Panzer_STK_Interface.hpp.

◆ getElementNodesNoResize() [4/4]

template<typename ArrayT >

void panzer_stk::STK_Interface::getElementNodesNoResize	(	const std::vector< stk::mesh::Entity > &	elements,
		const std::string &	eBlock,
		ArrayT &	nodes
	)		const

Get nodes associated with a number of elements of the same geometry. The node array will not be resized.

Parameters

[in]	elements	Element entities to construct nodes
[in]	eBlock	Element block the elements are in
[out]	nodes	Output array that will be sized (`localIds.size()`,#Nodes,#Dim)

Note: If not all elements have the same number of nodes an exception is thrown. If the size of localIds is 0, the function will silently return

Definition at line 2217 of file Panzer_STK_Interface.hpp.

◆ getElementRank()

stk::mesh::EntityRank panzer_stk::STK_Interface::getElementRank ( ) const

inline

Get the STK entity rank corresponding to elements.

Definition at line 1205 of file Panzer_STK_Interface.hpp.

◆ getSideRank()

stk::mesh::EntityRank panzer_stk::STK_Interface::getSideRank ( ) const

inline

Get the STK entity rank corresponding to sides (dimension one lower than element rank).

Definition at line 1207 of file Panzer_STK_Interface.hpp.

◆ getFaceRank()

stk::mesh::EntityRank panzer_stk::STK_Interface::getFaceRank ( ) const

inline

Get the STK entity rank corresponding to faces.

Definition at line 1209 of file Panzer_STK_Interface.hpp.

◆ getEdgeRank()

stk::mesh::EntityRank panzer_stk::STK_Interface::getEdgeRank ( ) const

inline

Get the STK entity rank corresponding to edges.

Definition at line 1211 of file Panzer_STK_Interface.hpp.

◆ getNodeRank()

stk::mesh::EntityRank panzer_stk::STK_Interface::getNodeRank ( ) const

inline

Get the STK entity rank corresponding to nodes.

Definition at line 1213 of file Panzer_STK_Interface.hpp.

◆ initializeFromMetaData()

void panzer_stk::STK_Interface::initializeFromMetaData ( )

Build fields and parts from the meta data

Definition at line 1675 of file Panzer_STK_Interface.cpp.

◆ buildLocalElementIDs()

void panzer_stk::STK_Interface::buildLocalElementIDs ( )

Setup local element IDs

Definition at line 1699 of file Panzer_STK_Interface.cpp.

◆ buildLocalEdgeIDs()

void panzer_stk::STK_Interface::buildLocalEdgeIDs ( )

Setup local edge IDs

Definition at line 1763 of file Panzer_STK_Interface.cpp.

◆ buildLocalFaceIDs()

void panzer_stk::STK_Interface::buildLocalFaceIDs ( )

Setup local face IDs

Definition at line 1783 of file Panzer_STK_Interface.cpp.

◆ getPeriodicBCVector() [1/2]

const std::vector< Teuchos::RCP< const PeriodicBC_MatcherBase > > & panzer_stk::STK_Interface::getPeriodicBCVector ( ) const

inline

Return a vector containing all the periodic boundary conditions.

Definition at line 1234 of file Panzer_STK_Interface.hpp.

◆ getPeriodicBCVector() [2/2]

std::vector< Teuchos::RCP< const PeriodicBC_MatcherBase > > & panzer_stk::STK_Interface::getPeriodicBCVector ( )

inline

Return a vector containing all the periodic boundary conditions.

Definition at line 1240 of file Panzer_STK_Interface.hpp.

◆ useBoundingBoxSearch()

const bool & panzer_stk::STK_Interface::useBoundingBoxSearch ( ) const

inline

Return a flag indicating if the bounding box search is used when matching periodic Ids.

Definition at line 1245 of file Panzer_STK_Interface.hpp.

◆ setBoundingBoxSearchFlag()

void panzer_stk::STK_Interface::setBoundingBoxSearchFlag ( const bool & searchFlag )

inline

Set the periodic search flag. Indicates if the bounding box search is used

Definition at line 1249 of file Panzer_STK_Interface.hpp.

◆ addPeriodicBC()

void panzer_stk::STK_Interface::addPeriodicBC ( const Teuchos::RCP< const PeriodicBC_MatcherBase > & bc )

inline

Add a periodic boundary condition.

Note: This does not actually change the underlying mesh. The object itself only communciates the matched IDs (currently nodes)

Definition at line 1257 of file Panzer_STK_Interface.hpp.

◆ addPeriodicBCs()

void panzer_stk::STK_Interface::addPeriodicBCs ( const std::vector< Teuchos::RCP< const PeriodicBC_MatcherBase > > & bc_vec )

inline

Add a set of periodic boundary conditions.

Note: This does not actually change the underlying mesh. The object itself only communciates the matched IDs (currently nodes)

Definition at line 1265 of file Panzer_STK_Interface.hpp.

◆ getPeriodicNodePairing()

std::pair< Teuchos::RCP< std::vector< std::pair< std::size_t, std::size_t > > >, Teuchos::RCP< std::vector< unsigned int > > > panzer_stk::STK_Interface::getPeriodicNodePairing ( ) const

Pairs DOFs on periodic entities

Definition at line 1826 of file Panzer_STK_Interface.cpp.

◆ validBlockId()

bool panzer_stk::STK_Interface::validBlockId ( const std::string & blockId ) const

check for a valid block id

Definition at line 1865 of file Panzer_STK_Interface.cpp.

◆ print()

void panzer_stk::STK_Interface::print ( std::ostream & os ) const

Print a brief description of the STK mesh to a stream.

Definition at line 1872 of file Panzer_STK_Interface.cpp.

◆ printMetaData()

void panzer_stk::STK_Interface::printMetaData ( std::ostream & os ) const

Print a brief description of the STK mesh to a stream.

Definition at line 1922 of file Panzer_STK_Interface.cpp.

◆ getCellTopology()

Teuchos::RCP< const shards::CellTopology > panzer_stk::STK_Interface::getCellTopology ( const std::string & eBlock ) const

Get the cell topology from the element block.

Definition at line 1962 of file Panzer_STK_Interface.cpp.

◆ getCurrentStateTime()

double panzer_stk::STK_Interface::getCurrentStateTime ( ) const

inline

Get the value of the time-stamp the last time this object was written to Exodus (default 0.0)

Note: The initial state time is completely disconnected from the current state time

Definition at line 1293 of file Panzer_STK_Interface.hpp.

◆ getInitialStateTime()

double panzer_stk::STK_Interface::getInitialStateTime ( ) const

inline

Get the value of the time-stamp when this object was created (default 0.0) or when setInitialStateTime was called.

Note: The initial state time is completely disconnected from the current state time

Definition at line 1300 of file Panzer_STK_Interface.hpp.

◆ setInitialStateTime()

void panzer_stk::STK_Interface::setInitialStateTime ( double value )

inline

Set the value of the initial time-stamp

Note: The initial state time is completely disconnected from the current state time

Definition at line 1306 of file Panzer_STK_Interface.hpp.

◆ rebalance()

void panzer_stk::STK_Interface::rebalance ( const Teuchos::ParameterList & params )

Rebalance using zoltan. Note that this will void the local element ids.

Definition at line 1989 of file Panzer_STK_Interface.cpp.

◆ setBlockWeight()

void panzer_stk::STK_Interface::setBlockWeight	(	const std::string &	blockId,
		double	weight
	)

inline

Set the weight for a particular element block. Larger means more costly to assemble and evaluate.

Definition at line 1315 of file Panzer_STK_Interface.hpp.

◆ setUseFieldCoordinates()

void panzer_stk::STK_Interface::setUseFieldCoordinates ( bool useFieldCoordinates )

inline

When coordinates are returned in the getElementNodes method, extract coordinates using a specified field (not the intrinsic coordinates) where available (where unavailable the intrinsic coordinates are used. Note that this does not change the behavior of getNodeCoordinates. This is set to false by default.

Definition at line 1324 of file Panzer_STK_Interface.hpp.

◆ getUseFieldCoordinates()

bool panzer_stk::STK_Interface::getUseFieldCoordinates ( ) const

inline

Return the use field coordinates flag

Definition at line 1328 of file Panzer_STK_Interface.hpp.

◆ setUseLowerCaseForIO()

void panzer_stk::STK_Interface::setUseLowerCaseForIO ( bool useLowerCase )

inline

Use lower case (or not) for I/O

Definition at line 1332 of file Panzer_STK_Interface.hpp.

◆ getUseLowerCaseForIO()

bool panzer_stk::STK_Interface::getUseLowerCaseForIO ( ) const

inline

Use lower case (or not) for I/O

Definition at line 1336 of file Panzer_STK_Interface.hpp.

◆ getElementVertices_FromField()

template<typename ArrayT >

void panzer_stk::STK_Interface::getElementVertices_FromField	(	const std::vector< stk::mesh::Entity > &	elements,
		const std::string &	eBlock,
		ArrayT &	vertices
	)		const

Get vertices associated with a number of elements of the same geometry, note that a coordinate field will be used (if not is available an exception will be thrown).

Parameters

[in]	elements	Element entities to construct vertices
[in]	eBlock	Element block the elements are in
[out]	vertices	Output array that will be sized (`localIds.size()`,#Vertices,#Dim)

Note: If not all elements have the same number of vertices an exception is thrown. If the size of localIds is 0, the function will silently return

Definition at line 2014 of file Panzer_STK_Interface.hpp.

◆ getElementVertices_FromFieldNoResize()

template<typename ArrayT >

void panzer_stk::STK_Interface::getElementVertices_FromFieldNoResize	(	const std::vector< stk::mesh::Entity > &	elements,
		const std::string &	eBlock,
		ArrayT &	vertices
	)		const

but the vertex array will not be resized.

Definition at line 2067 of file Panzer_STK_Interface.hpp.

◆ getElementVertices_FromCoords()

template<typename ArrayT >

void panzer_stk::STK_Interface::getElementVertices_FromCoords	(	const std::vector< stk::mesh::Entity > &	elements,
		ArrayT &	vertices
	)		const

Get vertices associated with a number of elements of the same geometry. This access the true mesh coordinates array.

Parameters

[in]	elements	Element entities to construct vertices
[out]	vertices	Output array that will be sized (`localIds.size()`,#Vertices,#Dim)

Note: If not all elements have the same number of vertices an exception is thrown. If the size of localIds is 0, the function will silently return

Definition at line 1917 of file Panzer_STK_Interface.hpp.

◆ getElementVertices_FromCoordsNoResize()

template<typename ArrayT >

void panzer_stk::STK_Interface::getElementVertices_FromCoordsNoResize	(	const std::vector< stk::mesh::Entity > &	elements,
		ArrayT &	vertices
	)		const

but the vertex array will not be resized.

Definition at line 1968 of file Panzer_STK_Interface.hpp.

◆ getElementNodes_FromField()

template<typename ArrayT >

void panzer_stk::STK_Interface::getElementNodes_FromField	(	const std::vector< stk::mesh::Entity > &	elements,
		const std::string &	eBlock,
		ArrayT &	nodes
	)		const

Get nodes associated with a number of elements of the same geometry, note that a coordinate field will be used (if not is available an exception will be thrown).

Parameters

[in]	elements	Element entities to construct nodes
[in]	eBlock	Element block the elements are in
[out]	nodes	Output array that will be sized (`localIds.size()`,#Nodes,#Dim)

Note: If not all elements have the same number of nodes an exception is thrown. If the size of localIds is 0, the function will silently return

Definition at line 2343 of file Panzer_STK_Interface.hpp.

◆ getElementNodes_FromFieldNoResize()

template<typename ArrayT >

void panzer_stk::STK_Interface::getElementNodes_FromFieldNoResize	(	const std::vector< stk::mesh::Entity > &	elements,
		const std::string &	eBlock,
		ArrayT &	nodes
	)		const

but the node array will not be resized.

Definition at line 2397 of file Panzer_STK_Interface.hpp.

◆ getElementNodes_FromCoords()

template<typename ArrayT >

void panzer_stk::STK_Interface::getElementNodes_FromCoords	(	const std::vector< stk::mesh::Entity > &	elements,
		ArrayT &	nodes
	)		const

Get nodes associated with a number of elements of the same geometry. This access the true mesh coordinates array.

Parameters

[in]	elements	Element entities to construct nodes
[out]	nodes	Output array that will be sized (`localIds.size()`,#Nodes,#Dim)

Note: If not all elements have the same number of nodes an exception is thrown. If the size of localIds is 0, the function will silently return

Definition at line 2246 of file Panzer_STK_Interface.hpp.

◆ getElementNodes_FromCoordsNoResize()

template<typename ArrayT >

void panzer_stk::STK_Interface::getElementNodes_FromCoordsNoResize	(	const std::vector< stk::mesh::Entity > &	elements,
		ArrayT &	nodes
	)		const

but the node array will not be resized.

Definition at line 2297 of file Panzer_STK_Interface.hpp.

◆ refineMesh()

void panzer_stk::STK_Interface::refineMesh	(	const int	numberOfLevels,
		const bool	deleteParentElements
	)

Uniformly refine the mesh using Percept

Parameters

[in]	numberOfLevels	Number of uniform refinement levels to apply. Must be >=1.
[in]	deleteParentElements	If true, deletes the parent elements from the mesh to save memory.

Definition at line 2024 of file Panzer_STK_Interface.cpp.

◆ buildEntityCounts()

void panzer_stk::STK_Interface::buildEntityCounts ( )

protected

Compute global entity counts.

Definition at line 1000 of file Panzer_STK_Interface.cpp.

◆ buildMaxEntityIds()

void panzer_stk::STK_Interface::buildMaxEntityIds ( )

protected

Compute global entity counts.

Definition at line 1006 of file Panzer_STK_Interface.cpp.

◆ initializeFieldsInSTK()

void panzer_stk::STK_Interface::initializeFieldsInSTK	(	const std::map< std::pair< std::string, std::string >, SolutionFieldType * > &	nameToField,
		bool	setupIO
	)

protected

Initialize STK fields using a map (allocate space for storage and writing) to a specific entity rank.

Parameters

[in]	nameToField	fields to initialize, keyed by (field name, element block ID).
[in]	setupIO	if true, also registers the fields for Exodus output.

Definition at line 367 of file Panzer_STK_Interface.cpp.

◆ getSafeCommunicator()

Teuchos::RCP< Teuchos::MpiComm< int > > panzer_stk::STK_Interface::getSafeCommunicator ( stk::ParallelMachine parallelMach ) const

protected

Build a safely handled Teuchos MPI communicator from a parallel machine. This object asserts ownership of the communicator so that we can gurantee existence so the outer user can do whatever they'd like with the original.

Definition at line 1978 of file Panzer_STK_Interface.cpp.

◆ applyElementLoadBalanceWeights()

void panzer_stk::STK_Interface::applyElementLoadBalanceWeights ( )

protected

In a pure local operation apply the user specified block weights for each element block to the field that defines the load balance weighting. This uses the blockWeights_ member to determine the user value that has been set for a particular element block.

Definition at line 1742 of file Panzer_STK_Interface.cpp.

◆ isMeshCoordField()

bool panzer_stk::STK_Interface::isMeshCoordField	(	const std::string &	eBlock,
		const std::string &	fieldName,
		int &	axis
	)		const

protected

Determine if a particular field in an element block is a displacement (mesh coordinate) field. If so, returns which spatial axis it displaces in the requested argument.

Parameters

[in]	eBlock	element block to check.
[in]	fieldName	name of the field to check.
[out]	axis	if the field is a displacement field, set to its spatial axis index (0=x, 1=y, 2=z); otherwise unspecified.

Definition at line 1804 of file Panzer_STK_Interface.cpp.

◆ setDispFieldData()

template<typename ArrayT >

void panzer_stk::STK_Interface::setDispFieldData	(	const std::string &	fieldName,
		const std::string &	blockId,
		int	axis,
		const std::vector< std::size_t > &	localElementIds,
		const ArrayT &	solutionValues
	)

protected

Writes a particular field to an array as a coordinate diplacement. Notice this is setup to work with the worksets associated with Panzer.

Parameters

[in]	fieldName	Name of field to be filled
[in]	blockId	Name of block this set of elements belongs to
[in]	dimension	What coordinate axis to write to
[in]	localElementIds	Local element IDs for this set of solution values
[in]	solutionValues	An two dimensional array object sized by (Cells,Basis Count)

Note: The block ID is not strictly needed in this context. However forcing the user to provide it does permit an additional level of safety. The implicit assumption is that the elements being "set" are part of the specified block. This prevents the need to perform a null pointer check on the field data, because the STK_Interface construction of the fields should force it to be nonnull...

Definition at line 1661 of file Panzer_STK_Interface.hpp.

Member Data Documentation

◆ coordsString

const std::string panzer_stk::STK_Interface::coordsString = "coordinates"

static

Definition at line 1419 of file Panzer_STK_Interface.hpp.

◆ nodesString

const std::string panzer_stk::STK_Interface::nodesString = "nodes"

static

Definition at line 1420 of file Panzer_STK_Interface.hpp.

◆ edgesString

const std::string panzer_stk::STK_Interface::edgesString = "edges"

static

Definition at line 1421 of file Panzer_STK_Interface.hpp.

◆ edgeBlockString

const std::string panzer_stk::STK_Interface::edgeBlockString = "edge_block"

static

Definition at line 1422 of file Panzer_STK_Interface.hpp.

◆ faceBlockString

const std::string panzer_stk::STK_Interface::faceBlockString = "face_block"

static

Definition at line 1423 of file Panzer_STK_Interface.hpp.

◆ facesString

const std::string panzer_stk::STK_Interface::facesString = "faces"

static

Definition at line 1424 of file Panzer_STK_Interface.hpp.

◆ periodicBCs_

std::vector<Teuchos::RCP<const PeriodicBC_MatcherBase> > panzer_stk::STK_Interface::periodicBCs_

protected

Definition at line 1486 of file Panzer_STK_Interface.hpp.

◆ useBBoxSearch_

bool panzer_stk::STK_Interface::useBBoxSearch_ = true

protected

Definition at line 1487 of file Panzer_STK_Interface.hpp.

◆ metaData_

Teuchos::RCP<stk::mesh::MetaData> panzer_stk::STK_Interface::metaData_

protected

Definition at line 1489 of file Panzer_STK_Interface.hpp.

◆ bulkData_

Teuchos::RCP<stk::mesh::BulkData> panzer_stk::STK_Interface::bulkData_

protected

Definition at line 1490 of file Panzer_STK_Interface.hpp.

◆ elementBlocks_

std::map<std::string, stk::mesh::Part*> panzer_stk::STK_Interface::elementBlocks_

protected

Definition at line 1496 of file Panzer_STK_Interface.hpp.

◆ sidesets_

std::map<std::string, stk::mesh::Part*> panzer_stk::STK_Interface::sidesets_

protected

Definition at line 1497 of file Panzer_STK_Interface.hpp.

◆ nodesets_

std::map<std::string, stk::mesh::Part*> panzer_stk::STK_Interface::nodesets_

protected

Definition at line 1498 of file Panzer_STK_Interface.hpp.

◆ edgeBlocks_

std::map<std::string, stk::mesh::Part*> panzer_stk::STK_Interface::edgeBlocks_

protected

Definition at line 1499 of file Panzer_STK_Interface.hpp.

◆ faceBlocks_

std::map<std::string, stk::mesh::Part*> panzer_stk::STK_Interface::faceBlocks_

protected

Definition at line 1500 of file Panzer_STK_Interface.hpp.

◆ elementBlockCT_

std::map<std::string, Teuchos::RCP<shards::CellTopology> > panzer_stk::STK_Interface::elementBlockCT_

protected

Definition at line 1502 of file Panzer_STK_Interface.hpp.

◆ nodesPart_

stk::mesh::Part* panzer_stk::STK_Interface::nodesPart_

protected

Definition at line 1505 of file Panzer_STK_Interface.hpp.

◆ nodesPartVec_

std::vector<stk::mesh::Part*> panzer_stk::STK_Interface::nodesPartVec_

protected

Definition at line 1506 of file Panzer_STK_Interface.hpp.

◆ edgesPart_

stk::mesh::Part* panzer_stk::STK_Interface::edgesPart_

protected

Definition at line 1507 of file Panzer_STK_Interface.hpp.

◆ edgesPartVec_

std::vector<stk::mesh::Part*> panzer_stk::STK_Interface::edgesPartVec_

protected

Definition at line 1508 of file Panzer_STK_Interface.hpp.

◆ facesPart_

stk::mesh::Part* panzer_stk::STK_Interface::facesPart_

protected

Definition at line 1509 of file Panzer_STK_Interface.hpp.

◆ facesPartVec_

std::vector<stk::mesh::Part*> panzer_stk::STK_Interface::facesPartVec_

protected

Definition at line 1510 of file Panzer_STK_Interface.hpp.

◆ coordinatesField_

VectorFieldType* panzer_stk::STK_Interface::coordinatesField_

protected

Definition at line 1512 of file Panzer_STK_Interface.hpp.

◆ edgesField_

VectorFieldType* panzer_stk::STK_Interface::edgesField_

protected

Definition at line 1513 of file Panzer_STK_Interface.hpp.

◆ facesField_

VectorFieldType* panzer_stk::STK_Interface::facesField_

protected

Definition at line 1514 of file Panzer_STK_Interface.hpp.

◆ processorIdField_

ProcIdFieldType* panzer_stk::STK_Interface::processorIdField_

protected

Definition at line 1515 of file Panzer_STK_Interface.hpp.

◆ loadBalField_

SolutionFieldType* panzer_stk::STK_Interface::loadBalField_

protected

Definition at line 1516 of file Panzer_STK_Interface.hpp.

◆ fieldNameToSolution_

std::map<std::pair<std::string,std::string>,SolutionFieldType*> panzer_stk::STK_Interface::fieldNameToSolution_

protected

Definition at line 1519 of file Panzer_STK_Interface.hpp.

◆ fieldNameToCellField_

std::map<std::pair<std::string,std::string>,SolutionFieldType*> panzer_stk::STK_Interface::fieldNameToCellField_

protected

Definition at line 1520 of file Panzer_STK_Interface.hpp.

◆ fieldNameToEdgeField_

std::map<std::pair<std::string,std::string>,SolutionFieldType*> panzer_stk::STK_Interface::fieldNameToEdgeField_

protected

Definition at line 1521 of file Panzer_STK_Interface.hpp.

◆ fieldNameToFaceField_

std::map<std::pair<std::string,std::string>,SolutionFieldType*> panzer_stk::STK_Interface::fieldNameToFaceField_

protected

Definition at line 1522 of file Panzer_STK_Interface.hpp.

◆ informationRecords_

std::set<std::string> panzer_stk::STK_Interface::informationRecords_

protected

Definition at line 1525 of file Panzer_STK_Interface.hpp.

◆ dimension_

unsigned panzer_stk::STK_Interface::dimension_

protected

Definition at line 1527 of file Panzer_STK_Interface.hpp.

◆ initialized_

bool panzer_stk::STK_Interface::initialized_

protected

Definition at line 1529 of file Panzer_STK_Interface.hpp.

◆ entityCounts_

std::vector<std::size_t> panzer_stk::STK_Interface::entityCounts_

protected

Definition at line 1532 of file Panzer_STK_Interface.hpp.

◆ maxEntityId_

std::vector<stk::mesh::EntityId> panzer_stk::STK_Interface::maxEntityId_

protected

Definition at line 1535 of file Panzer_STK_Interface.hpp.

◆ procRank_

unsigned panzer_stk::STK_Interface::procRank_

protected

Definition at line 1537 of file Panzer_STK_Interface.hpp.

◆ currentLocalId_

std::size_t panzer_stk::STK_Interface::currentLocalId_

protected

Definition at line 1538 of file Panzer_STK_Interface.hpp.

◆ mpiComm_

Teuchos::RCP<Teuchos::MpiComm<int> > panzer_stk::STK_Interface::mpiComm_

protected

Definition at line 1540 of file Panzer_STK_Interface.hpp.

◆ initialStateTime_

double panzer_stk::STK_Interface::initialStateTime_

protected

Definition at line 1542 of file Panzer_STK_Interface.hpp.

◆ currentStateTime_

double panzer_stk::STK_Interface::currentStateTime_

protected

Definition at line 1543 of file Panzer_STK_Interface.hpp.

◆ orderedElementVector_

Teuchos::RCP<std::vector<stk::mesh::Entity> > panzer_stk::STK_Interface::orderedElementVector_

mutableprotected

Definition at line 1587 of file Panzer_STK_Interface.hpp.

◆ orderedEdgeVector_

Teuchos::RCP<std::vector<stk::mesh::Entity> > panzer_stk::STK_Interface::orderedEdgeVector_

mutableprotected

Definition at line 1590 of file Panzer_STK_Interface.hpp.

◆ orderedFaceVector_

Teuchos::RCP<std::vector<stk::mesh::Entity> > panzer_stk::STK_Interface::orderedFaceVector_

mutableprotected

Definition at line 1593 of file Panzer_STK_Interface.hpp.

◆ blockWeights_

std::map<std::string,double> panzer_stk::STK_Interface::blockWeights_

protected

Definition at line 1596 of file Panzer_STK_Interface.hpp.

◆ localIDHash_

std::unordered_map<stk::mesh::EntityId,std::size_t> panzer_stk::STK_Interface::localIDHash_

protected

Definition at line 1598 of file Panzer_STK_Interface.hpp.

◆ localEdgeIDHash_

std::unordered_map<stk::mesh::EntityId,std::size_t> panzer_stk::STK_Interface::localEdgeIDHash_

protected

Definition at line 1599 of file Panzer_STK_Interface.hpp.

◆ localFaceIDHash_

std::unordered_map<stk::mesh::EntityId,std::size_t> panzer_stk::STK_Interface::localFaceIDHash_

protected

Definition at line 1600 of file Panzer_STK_Interface.hpp.

◆ meshCoordFields_

std::map<std::string,std::vector<std::string> > panzer_stk::STK_Interface::meshCoordFields_

protected

Definition at line 1605 of file Panzer_STK_Interface.hpp.

◆ meshDispFields_

std::map<std::string,std::vector<std::string> > panzer_stk::STK_Interface::meshDispFields_

protected

Definition at line 1606 of file Panzer_STK_Interface.hpp.

◆ useFieldCoordinates_

bool panzer_stk::STK_Interface::useFieldCoordinates_

protected

Definition at line 1608 of file Panzer_STK_Interface.hpp.

◆ useLowerCase_

bool panzer_stk::STK_Interface::useLowerCase_

protected

Definition at line 1610 of file Panzer_STK_Interface.hpp.

The documentation for this class was generated from the following files:

Classes

Public Types

Public Member Functions

Static Public Attributes

Protected Member Functions

Protected Attributes

Detailed Description

Member Typedef Documentation

◆ ProcIdData

◆ SolutionFieldType

◆ VectorFieldType

◆ ProcIdFieldType

Constructor & Destructor Documentation

◆ STK_Interface() [1/3]

◆ STK_Interface() [2/3]

◆ STK_Interface() [3/3]

Member Function Documentation

◆ addElementBlock()

◆ addEdgeBlock() [1/2]

◆ addEdgeBlock() [2/2]

◆ addFaceBlock() [1/2]

◆ addFaceBlock() [2/2]

◆ addSideset()

◆ addNodeset()

◆ addSolutionField()

◆ addCellField()

◆ addEdgeField()

◆ addFaceField()

◆ addMeshCoordFields()

◆ addInformationRecords()

◆ initialize()

◆ instantiateBulkData()

◆ beginModification()

◆ endModification()

◆ addNode()

◆ addElement()

◆ addEdges()

◆ addFaces()

◆ addEntityToSideset()

◆ addEntityToNodeset()

◆ addEntityToEdgeBlock()

◆ addEntitiesToEdgeBlock()

◆ addEntityToFaceBlock()

◆ addEntitiesToFaceBlock()

◆ getCoordinatesField()

◆ getEdgesField()

◆ getFacesField()

◆ getNodeCoordinates() [1/2]

◆ getNodeCoordinates() [2/2]

◆ getSubcellIndices()

◆ getMyElements() [1/2]

◆ getMyElements() [2/2]

◆ getNeighborElements() [1/2]

◆ getNeighborElements() [2/2]

◆ getMyEdges() [1/3]

◆ getMyEdges() [2/3]

◆ getMyEdges() [3/3]

◆ getAllEdges() [1/2]

◆ getAllEdges() [2/2]

◆ getMyFaces() [1/3]

◆ getMyFaces() [2/3]

◆ getMyFaces() [3/3]

◆ getAllFaces() [1/2]

◆ getAllFaces() [2/2]

◆ getMySides() [1/2]

◆ getMySides() [2/2]

◆ getAllSides() [1/2]

◆ getAllSides() [2/2]

◆ getMyNodes()

◆ findConnectivityById()

◆ writeToExodus() [1/2]

◆ setupExodusFile() [1/2]

◆ setupExodusFile() [2/2]

◆ writeToExodus() [2/2]

◆ addGlobalToExodus() [1/4]

◆ addGlobalToExodus() [2/4]

◆ addGlobalToExodus() [3/4]

◆ addGlobalToExodus() [4/4]

◆ getComm()

◆ getBulkData()