Ifpack2_DenseContainer_def.hpp

// @HEADER
// *****************************************************************************
//       Ifpack2: Templated Object-Oriented Algebraic Preconditioner Package
//
// Copyright 2009 NTESS and the Ifpack2 contributors.
// SPDX-License-Identifier: BSD-3-Clause
// *****************************************************************************
// @HEADER
 
#ifndef IFPACK2_DENSECONTAINER_DEF_HPP
#define IFPACK2_DENSECONTAINER_DEF_HPP
 
#include "Tpetra_CrsMatrix.hpp"
#include "Teuchos_LAPACK.hpp"
#include "Tpetra_BlockMultiVector.hpp"
 
#ifdef HAVE_MPI
#include <mpi.h>
#include "Teuchos_DefaultMpiComm.hpp"
#else
#include "Teuchos_DefaultSerialComm.hpp"
#endif  // HAVE_MPI
 
namespace Ifpack2 {
 
template <class MatrixType, class LocalScalarType>
DenseContainer<MatrixType, LocalScalarType>::
    DenseContainer(const Teuchos::RCP<const row_matrix_type>& matrix,
                   const Teuchos::Array<Teuchos::Array<LO> >& partitions,
                   const Teuchos::RCP<const import_type>&,
                   bool pointIndexed)
  : ContainerImpl<MatrixType, LocalScalarType>(matrix, partitions, pointIndexed)
  , scalarOffsets_(this->numBlocks_) {
  TEUCHOS_TEST_FOR_EXCEPTION(
      !matrix->hasColMap(), std::invalid_argument,
      "Ifpack2::DenseContainer: "
      "The constructor's input matrix must have a column Map.");
 
  // compute scalarOffsets_
  GO totalScalars = 0;
  for (LO i = 0; i < this->numBlocks_; i++) {
    scalarOffsets_[i] = totalScalars;
    totalScalars += this->blockSizes_[i] * this->scalarsPerRow_ *
                    this->blockSizes_[i] * this->scalarsPerRow_;
  }
  scalars_.resize(totalScalars);
  for (int i = 0; i < this->numBlocks_; i++) {
    LO denseRows = this->blockSizes_[i] * this->scalarsPerRow_;
    // create square dense matrix (stride is same as rows and cols)
    diagBlocks_.emplace_back(Teuchos::View, scalars_.data() + scalarOffsets_[i], denseRows, denseRows, denseRows);
  }
 
  ipiv_.resize(this->blockRows_.size() * this->scalarsPerRow_);
}
 
template <class MatrixType, class LocalScalarType>
DenseContainer<MatrixType, LocalScalarType>::
    ~DenseContainer() {}
 
template <class MatrixType, class LocalScalarType>
void DenseContainer<MatrixType, LocalScalarType>::
    initialize() {
  // Fill the diagonal block and LU permutation array with zeros.
  for (int i = 0; i < this->numBlocks_; i++)
    diagBlocks_[i].putScalar(Teuchos::ScalarTraits<LSC>::zero());
  std::fill(ipiv_.begin(), ipiv_.end(), 0);
 
  this->IsInitialized_ = true;
  // We assume that if you called this method, you intend to recompute
  // everything.
  this->IsComputed_ = false;
}
 
template <class MatrixType, class LocalScalarType>
void DenseContainer<MatrixType, LocalScalarType>::
    compute() {
  // FIXME: I am commenting this out because it breaks block CRS support
  //  TEUCHOS_TEST_FOR_EXCEPTION(
  //    static_cast<size_t> (ipiv_.size ()) != numRows_, std::logic_error,
  //    "Ifpack2::DenseContainer::compute: ipiv_ array has the wrong size.  "
  //    "Please report this bug to the Ifpack2 developers.");
 
  this->IsComputed_ = false;
  if (!this->isInitialized()) {
    this->initialize();
  }
 
  extract();  // Extract the submatrices
  factor();   // Factor them
  this->IsComputed_ = true;
}
 
template <class MatrixType, class LocalScalarType>
void DenseContainer<MatrixType, LocalScalarType>::extract() {
  using Teuchos::Array;
  using Teuchos::ArrayView;
  using STS        = Teuchos::ScalarTraits<SC>;
  SC zero          = STS::zero();
  const LO INVALID = Teuchos::OrdinalTraits<LO>::invalid();
  // To extract diagonal blocks, need to translate local rows to local columns.
  // Strategy: make a lookup table that translates local cols in the matrix to offsets in blockRows_:
  // blockOffsets_[b] <= offset < blockOffsets_[b+1]: tests whether the column is in block b.
  // offset - blockOffsets_[b]: gives the column within block b.
  //
  // This provides the block and col within a block in O(1).
  if (this->scalarsPerRow_ > 1) {
    Array<LO> colToBlockOffset(this->inputBlockMatrix_->getLocalNumCols(), INVALID);
    for (int i = 0; i < this->numBlocks_; i++) {
      // Get the interval where block i is defined in blockRows_
      LO blockStart                 = this->blockOffsets_[i];
      LO blockEnd                   = blockStart + this->blockSizes_[i];
      ArrayView<const LO> blockRows = this->getBlockRows(i);
      // Set the lookup table entries for the columns appearing in block i.
      // If OverlapLevel_ > 0, then this may overwrite values for previous blocks, but
      // this is OK. The values updated here are only needed to process block i's entries.
      for (size_t j = 0; j < size_t(blockRows.size()); j++) {
        LO localCol                = this->translateRowToCol(blockRows[j]);
        colToBlockOffset[localCol] = blockStart + j;
      }
      using h_inds_type = typename block_crs_matrix_type::local_inds_host_view_type;
      using h_vals_type = typename block_crs_matrix_type::values_host_view_type;
      for (LO blockRow = 0; blockRow < LO(blockRows.size()); blockRow++) {
        // get a raw view of the whole block row
        h_inds_type indices;
        h_vals_type values;
        LO inputRow = this->blockRows_[blockStart + blockRow];
        this->inputBlockMatrix_->getLocalRowView(inputRow, indices, values);
        LO numEntries = (LO)indices.size();
        for (LO k = 0; k < numEntries; k++) {
          LO colOffset = colToBlockOffset[indices[k]];
          if (blockStart <= colOffset && colOffset < blockEnd) {
            // This entry does appear in the diagonal block.
            //(br, bc) identifies the scalar's position in the BlockCrs block.
            // Convert this to (r, c) which is its position in the container block.
            LO blockCol = colOffset - blockStart;
            for (LO bc = 0; bc < this->bcrsBlockSize_; bc++) {
              for (LO br = 0; br < this->bcrsBlockSize_; br++) {
                LO r     = this->bcrsBlockSize_ * blockRow + br;
                LO c     = this->bcrsBlockSize_ * blockCol + bc;
                auto val = values[k * (this->bcrsBlockSize_ * this->bcrsBlockSize_) + (br + this->bcrsBlockSize_ * bc)];
                if (val != zero)
                  diagBlocks_[i](r, c) = val;
              }
            }
          }
        }
      }
    }
  } else {
    // get the mapping from point-indexed matrix columns to offsets in blockRows_
    //(this includes regular CrsMatrix columns, in which case bcrsBlockSize_ == 1)
    Array<LO> colToBlockOffset(this->inputMatrix_->getLocalNumCols() * this->bcrsBlockSize_, INVALID);
    for (int i = 0; i < this->numBlocks_; i++) {
      // Get the interval where block i is defined in blockRows_
      LO blockStart                 = this->blockOffsets_[i];
      LO blockEnd                   = blockStart + this->blockSizes_[i];
      ArrayView<const LO> blockRows = this->getBlockRows(i);
      // Set the lookup table entries for the columns appearing in block i.
      // If OverlapLevel_ > 0, then this may overwrite values for previous blocks, but
      // this is OK. The values updated here are only needed to process block i's entries.
      for (size_t j = 0; j < size_t(blockRows.size()); j++) {
        // translateRowToCol will return the corresponding split column
        LO localCol                = this->translateRowToCol(blockRows[j]);
        colToBlockOffset[localCol] = blockStart + j;
      }
      for (size_t blockRow = 0; blockRow < size_t(blockRows.size()); blockRow++) {
        // get a view of the split row
        LO inputPointRow = this->blockRows_[blockStart + blockRow];
        auto rowView     = this->getInputRowView(inputPointRow);
        for (size_t k = 0; k < rowView.size(); k++) {
          LO colOffset = colToBlockOffset[rowView.ind(k)];
          if (blockStart <= colOffset && colOffset < blockEnd) {
            LO blockCol = colOffset - blockStart;
            auto val    = rowView.val(k);
            if (val != zero)
              diagBlocks_[i](blockRow, blockCol) = rowView.val(k);
          }
        }
      }
    }
  }
}
 
template <class MatrixType, class LocalScalarType>
void DenseContainer<MatrixType, LocalScalarType>::
    factor() {
  Teuchos::LAPACK<int, LSC> lapack;
  for (int i = 0; i < this->numBlocks_; i++) {
    int INFO       = 0;
    int* blockIpiv = &ipiv_[this->blockOffsets_[i] * this->scalarsPerRow_];
    lapack.GETRF(diagBlocks_[i].numRows(),
                 diagBlocks_[i].numCols(),
                 diagBlocks_[i].values(),
                 diagBlocks_[i].stride(),
                 blockIpiv, &INFO);
    // INFO < 0 is a bug.
    TEUCHOS_TEST_FOR_EXCEPTION(
        INFO < 0, std::logic_error,
        "Ifpack2::DenseContainer::factor: "
        "LAPACK's _GETRF (LU factorization with partial pivoting) was called "
        "incorrectly.  INFO = "
            << INFO << " < 0.  "
                       "Please report this bug to the Ifpack2 developers.");
    // INFO > 0 means the matrix is singular.  This is probably an issue
    // either with the choice of rows the rows we extracted, or with the
    // input matrix itself.
    TEUCHOS_TEST_FOR_EXCEPTION(
        INFO > 0, std::runtime_error,
        "Ifpack2::DenseContainer::factor: "
        "LAPACK's _GETRF (LU factorization with partial pivoting) reports that the "
        "computed U factor is exactly singular.  U("
            << INFO << "," << INFO << ") "
                                      "(one-based index i) is exactly zero.  This probably means that the input "
                                      "matrix has a singular diagonal block.");
  }
}
 
template <class MatrixType, class LocalScalarType>
void DenseContainer<MatrixType, LocalScalarType>::
    solveBlock(ConstHostSubviewLocal X,
               HostSubviewLocal Y,
               int blockIndex,
               Teuchos::ETransp mode,
               LSC alpha,
               LSC beta) const {
#ifdef HAVE_IFPACK2_DEBUG
  TEUCHOS_TEST_FOR_EXCEPTION(
      X.extent(0) != Y.extent(0),
      std::logic_error,
      "Ifpack2::DenseContainer::solveBlock: X and Y have "
      "incompatible dimensions ("
          << X.extent(0) << " resp. "
          << Y.extent(0) << ").  Please report this bug to "
                            "the Ifpack2 developers.");
 
  TEUCHOS_TEST_FOR_EXCEPTION(
      X.extent(1) != Y.extent(1),
      std::logic_error,
      "Ifpack2::DenseContainer::solveBlock: X and Y have "
      "incompatible numbers of vectors ("
          << X.extent(1) << " resp. "
          << Y.extent(1) << ").  Please report this bug to "
                            "the Ifpack2 developers.");
#endif
 
  typedef Teuchos::ScalarTraits<LSC> STS;
  size_t numRows = X.extent(0);
  size_t numVecs = X.extent(1);
  if (alpha == STS::zero()) {  // don't need to solve the linear system
    if (beta == STS::zero()) {
      // Use BLAS AXPY semantics for beta == 0: overwrite, clobbering
      // any Inf or NaN values in Y (rather than multiplying them by
      // zero, resulting in NaN values).
      for (size_t j = 0; j < numVecs; j++) {
        for (size_t i = 0; i < numRows; i++)
          Y(i, j) = STS::zero();
      }
    } else  // beta != 0
      for (size_t j = 0; j < numVecs; j++) {
        for (size_t i = 0; i < numRows; i++)
          Y(i, j) = beta * Y(i, j);
      }
  } else {  // alpha != 0; must solve the linear system
    Teuchos::LAPACK<int, LSC> lapack;
    // If beta is nonzero or Y is not constant stride, we have to use
    // a temporary output multivector.  It gets a (deep) copy of X,
    // since GETRS overwrites its (multi)vector input with its output.
    std::vector<LSC> yTemp(numVecs * numRows);
    for (size_t j = 0; j < numVecs; j++) {
      for (size_t i = 0; i < numRows; i++)
        yTemp[j * numRows + i] = X(i, j);
    }
 
    int INFO       = 0;
    int* blockIpiv = &ipiv_[this->blockOffsets_[blockIndex] * this->scalarsPerRow_];
    const char trans =
        (mode == Teuchos::CONJ_TRANS ? 'C' : (mode == Teuchos::TRANS ? 'T' : 'N'));
    lapack.GETRS(trans,
                 diagBlocks_[blockIndex].numRows(),
                 numVecs,
                 diagBlocks_[blockIndex].values(),
                 diagBlocks_[blockIndex].stride(),
                 blockIpiv,
                 yTemp.data(),
                 numRows,
                 &INFO);
 
    if (beta != STS::zero()) {
      for (size_t j = 0; j < numVecs; j++) {
        for (size_t i = 0; i < numRows; i++) {
          Y(i, j) *= ISC(beta);
          Y(i, j) += ISC(alpha * yTemp[j * numRows + i]);
        }
      }
    } else {
      for (size_t j = 0; j < numVecs; j++) {
        for (size_t i = 0; i < numRows; i++)
          Y(i, j) = ISC(yTemp[j * numRows + i]);
      }
    }
 
    TEUCHOS_TEST_FOR_EXCEPTION(
        INFO != 0, std::runtime_error,
        "Ifpack2::DenseContainer::solveBlock: "
        "LAPACK's _GETRS (solve using LU factorization with partial pivoting) "
        "failed with INFO = "
            << INFO << " != 0.");
  }
}
 
template <class MatrixType, class LocalScalarType>
std::ostream&
DenseContainer<MatrixType, LocalScalarType>::
    print(std::ostream& os) const {
  Teuchos::FancyOStream fos(Teuchos::rcpFromRef(os));
  fos.setOutputToRootOnly(0);
  this->describe(fos);
  return os;
}
 
template <class MatrixType, class LocalScalarType>
std::string
DenseContainer<MatrixType, LocalScalarType>::
    description() const {
  std::ostringstream oss;
  oss << "Ifpack::DenseContainer: ";
  if (this->isInitialized()) {
    if (this->isComputed()) {
      oss << "{status = initialized, computed";
    } else {
      oss << "{status = initialized, not computed";
    }
  } else {
    oss << "{status = not initialized, not computed";
  }
 
  oss << "}";
  return oss.str();
}
 
template <class MatrixType, class LocalScalarType>
void DenseContainer<MatrixType, LocalScalarType>::
    describe(Teuchos::FancyOStream& os,
             const Teuchos::EVerbosityLevel verbLevel) const {
  using std::endl;
  if (verbLevel == Teuchos::VERB_NONE) return;
  os << "================================================================================" << endl;
  os << "Ifpack2::DenseContainer" << endl;
  for (int i = 0; i < this->numBlocks_; i++) {
    os << "Block " << i << " number of rows          = " << this->blockSizes_[i] << endl;
  }
  os << "isInitialized()         = " << this->IsInitialized_ << endl;
  os << "isComputed()            = " << this->IsComputed_ << endl;
  os << "================================================================================" << endl;
  os << endl;
}
 
template <class MatrixType, class LocalScalarType>
void DenseContainer<MatrixType, LocalScalarType>::clearBlocks() {
  diagBlocks_.clear();
  scalars_.clear();
  ContainerImpl<MatrixType, LocalScalarType>::clearBlocks();
}
 
template <class MatrixType, class LocalScalarType>
std::string DenseContainer<MatrixType, LocalScalarType>::getName() {
  return "Dense";
}
 
}  // namespace Ifpack2
 
// There's no need to instantiate for CrsMatrix too.  All Ifpack2
// preconditioners can and should do dynamic casts if they need a type
// more specific than RowMatrix.
 
#define IFPACK2_DENSECONTAINER_INSTANT(S, LO, GO, N) \
  template class Ifpack2::DenseContainer<Tpetra::RowMatrix<S, LO, GO, N>, S>;
 
#endif  // IFPACK2_DENSECONTAINER_DEF_HPP